README.rdoc in bio-1.3.1 vs README.rdoc in bio-1.4.0

- old
+ new

@@ -38,10 +38,11 @@ === Documents in this distribution ==== General information README.rdoc:: This file. General information and installation procedure. +RELEASE_NOTES.rdoc:: News and important changes in this release. KNOWN_ISSUES.rdoc:: Known issues and bugs in BioRuby. doc/Changes-1.3.rdoc:: News and incompatible changes from 1.2.1 to 1.3.0. doc/Changes-0.7.rd:: News and incompatible changes from 0.6.4 to 1.2.1. ==== Tutorials and other useful information @@ -110,12 +111,12 @@ % cvs -d :pserver:cvs@code.open-bio.org:/home/repository/bioruby co bioruby == REQUIREMENTS -* Ruby 1.8.2 or later -- http://www.ruby-lang.org/ - * Ruby 1.8.5 or later is recommended. +* Ruby 1.8.2 or later (except Ruby 1.9.0) -- http://www.ruby-lang.org/ + * Ruby 1.8.7-p174 or later, or Ruby 1.8.6-p383 or later is recommended. * Not yet fully ready with Ruby 1.9, although many components can now work in Ruby 1.9.1. == OPTIONAL REQUIREMENTS @@ -142,9 +143,14 @@ * For BioRuby 1.2.1 or older version, {RubyForge:Ruby/DBI}[http://rubyforge.org/projects/ruby-dbi] and at least one driver from MySQL/Ruby, postgres-pr, or {RubyForge:ruby-oci8}[http://ruby-oci8.rubyforge.org/] (note that ruby-oci8 can only work with ruby-dbi 0.2.2). + +For parsing PhyloXML format files: + +* {RubyForge:libxml-ruby}[http://libxml.rubyforge.org/] (Ruby language + bindings for the {GNOME Libxml2 XML toolkit}[http://xmlsoft.org/]) == INSTALL In the bioruby source directory (such as bioruby-x.x.x/), run setup.rb