lib/bio-ucsc/orycun2.rb in bio-ucsc-api-0.3.1 vs lib/bio-ucsc/orycun2.rb in bio-ucsc-api-0.4.0

@@ -4,21 +4,23 @@
 #               MISHIMA, Hiroyuki
 #               <missy at be.to / hmishima at nagasaki-u.ac.jp> 
 # License::     The Ruby licence (Ryby's / GPLv2 dual)
 #
 
-require "#{File.dirname(__FILE__)}/orycun2/db_connection"
-require "#{File.dirname(__FILE__)}/table_class_detector"
+require "#{::File.dirname(__FILE__)}/db_connector"
+require "#{::File.dirname(__FILE__)}/table_class_detector"
 
 module Bio
   module Ucsc
     module OryCun2
       CHROMS =
 %w(Chr1 Chr2 Chr3 Chr4 Chr5 Chr6 Chr7 Chr8 Chr9
 Chr10 Chr11 Chr12 Chr13 Chr14 Chr15 Chr16 Chr17 Chr18 Chr19
 Chr20 Chr21 ChrX)
       extend TableClassDetector
+      include DBConnector
+      DBConnection.database "oryCun2"
 
-      base = "#{File.dirname(__FILE__)}/orycun2"
+      base = "#{::File.dirname(__FILE__)}/orycun2"
     end
   end
 end