hg18.rb in bio-ucsc-api-0.1.0

- old
+ new

@@ -1,11 +1,9 @@
 #
 # = hg18/ucsc.rb
 # Copyright::   Cioyrught (C) 2011
 #               MISHIMA, Hiroyuki <missy at be.to / hmishima at nagasaki-u.ac.jp> 
-# Copyright::   Copyright (C) 2008
-#               Jan Aerts <jan.aerts@gmail.com>
 # License::     Ruby's
 
 base = "#{File.dirname(__FILE__)}/hg18"
 require "#{base}/db_connection"
 require "#{base}/activerecord"
@@ -13,11 +11,12 @@
 module Bio
   module Ucsc
     module Hg18
       base = "#{File.dirname(__FILE__)}/hg18"
       # Reference sequence retrieval via the 2bit file
-      autoload :Reference,    "#{base}/reference"
+      autoload :Reference, "#{base}/reference" # OBSOLETE
+      autoload :ReferenceSequence, "#{base}/reference_sequence"
 
       # group: Mapping and Sequencing Tracks ----------
       #
       ## track: Chromosome Band
       autoload :CytoBand,     "#{base}/cytoband"
@@ -3865,6 +3864,5 @@
       ## track: NHGRI DIPs
       autoload :EncodeIndels, "#{base}/encodeindels"
     end
   end
 end
-