dataframe_spec.rb in bio-publisci-0.0.7

- old
+ new

@@ -1,22 +1,22 @@
 require_relative '../../lib/bio-publisci.rb'
 
-describe R2RDF::Reader::Dataframe do
-	
+describe PubliSci::Reader::Dataframe do
+
 	def create_graph(turtle_string)
 		f = Tempfile.new('graph')
 		f.write(turtle_string)
 		f.close
 		graph = RDF::Graph.load(f.path, :format => :ttl)
 		f.unlink
 		graph
 	end
 
   context "with r/qtl dataframe", no_travis: true do
-		before(:all) do 
+		before(:all) do
 			@r = Rserve::Connection.new
-			@generator = R2RDF::Reader::Dataframe.new
+			@generator = PubliSci::Reader::Dataframe.new
 			@r.eval <<-EOF
 				library(qtl)
 				data(listeria)
 				mr = scanone(listeria,method="mr")
 EOF
@@ -26,19 +26,19 @@
 
 		it "generates rdf from R dataframe" do
 			turtle = @generator.generate_n3(@rexp,'mr')
 			turtle.is_a?(String).should be true
 		end
-		
+
 		it "creates correct graph according to refrence file" do
 			reference = IO.read(File.dirname(__FILE__) + '/../turtle/reference')
 			@turtle.should eq reference
 		end
 
 		it "can optionally specify a row label" do
 			@turtle = @generator.generate_n3(@rexp,'mr',{row_label:"markers"})
 		end
 	end
 
-		
+
 
 end
\ No newline at end of file