lib/bio/PolyploidTools/ExonContainer.rb in bio-polyploid-tools-0.2.3 vs lib/bio/PolyploidTools/ExonContainer.rb in bio-polyploid-tools-0.3.1

@@ -79,15 +79,11 @@
 
         end
       end
     end
 
-    def primer_3_input_for_snp(snp)
-      gene_region = snp.covered_region
-      local_pos_in_gene = snp.local_position
-      puts ""
-    end
+   
 
     def fasta_string_for_snp(snp)
       gene_region = snp.covered_region
       local_pos_in_gene = snp.local_position
       ret_str = ""
@@ -108,10 +104,9 @@
         l_pos = exon_start_offset + local_pos_in_gene
         to_print <<  chr_seq
         to_print[local_pos_in_gene] = to_print[local_pos_in_gene].upcase
         ret_str << to_print
       end
-      puts ret_str
       ret_str
     end
 
     def print_fasta_snp_exones (file)
       @missing_exons = Set.new unless @missing_exons
\ No newline at end of file