bio-polyploid-tools.gemspec in bio-polyploid-tools-0.8.4 vs bio-polyploid-tools.gemspec in bio-polyploid-tools-0.8.5
- old
+ new
@@ -1,19 +1,19 @@
# Generated by juwelier
# DO NOT EDIT THIS FILE DIRECTLY
# Instead, edit Juwelier::Tasks in Rakefile, and run 'rake gemspec'
# -*- encoding: utf-8 -*-
-# stub: bio-polyploid-tools 0.8.4 ruby lib
+# stub: bio-polyploid-tools 0.8.5 ruby lib
Gem::Specification.new do |s|
s.name = "bio-polyploid-tools".freeze
- s.version = "0.8.4"
+ s.version = "0.8.5"
s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version=
s.require_paths = ["lib".freeze]
s.authors = ["Ricardo H. Ramirez-Gonzalez".freeze]
- s.date = "2018-02-27"
+ s.date = "2018-07-31"
s.description = "Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat".freeze
s.email = "ricardo.ramirez-gonzalez@jic.ac.uk".freeze
s.executables = ["bfr.rb".freeze, "blast_triads.rb".freeze, "blast_triads_promoters.rb".freeze, "count_variations.rb".freeze, "filter_blat_by_target_coverage.rb".freeze, "filter_exonerate_by_identity.rb".freeze, "find_best_blat_hit.rb".freeze, "find_best_exonerate.rb".freeze, "find_homoeologue_variations.rb".freeze, "get_longest_hsp_blastx_triads.rb".freeze, "hexaploid_primers.rb".freeze, "homokaryot_primers.rb".freeze, "mafft_triads.rb".freeze, "mafft_triads_promoters.rb".freeze, "map_markers_to_contigs.rb".freeze, "markers_in_region.rb".freeze, "mask_triads.rb".freeze, "polymarker.rb".freeze, "polymarker_capillary.rb".freeze, "snp_position_to_polymarker.rb".freeze, "snps_between_bams.rb".freeze, "tag_stats.rb".freeze, "vcfLineToTable.rb".freeze]
s.extra_rdoc_files = [
"README",
@@ -149,9 +149,11 @@
"test/data/S58861868/merged_reheader.bam",
"test/data/S58861868/merged_reheader.bam.bai",
"test/data/Test3Aspecific.csv",
"test/data/Test3Aspecific_contigs.fa",
"test/data/bfr_out_test.csv",
+ "test/data/chr4D_C14473543T/chr4D_C14473543T.csv",
+ "test/data/chr4D_C14473543T/chr4D_C14473543T.fa",
"test/data/headerMergeed.txt",
"test/data/headerS2238015",
"test/data/mergedLibs.bam",
"test/data/mergedLibsReheader.bam",
"test/data/mergedLibsSorted.bam",