bin/homokaryot_primers.rb in bio-polyploid-tools-0.1.0 vs bin/homokaryot_primers.rb in bio-polyploid-tools-0.2.3

@@ -80,10 +80,10 @@
 snps = Array.new
 
 #0. Load the fasta index 
 fasta_reference_db = nil
 if reference_file
-  fasta_reference_db = Bio::DB::Fasta::FastaFile.new(reference_file)
+  fasta_reference_db = Bio::DB::Fasta::FastaFile.new({:fasta=>reference_file})
   fasta_reference_db.load_fai_entries
   p "Fasta reference: #{reference_file}"
 end
 #1. Read all the SNP files 
 #All the SNPs should be on the same chromosome as the first SNP. 
\ No newline at end of file