lib/bio/db/gff/gffnocache.rb in bio-gff3-0.8.3 vs lib/bio/db/gff/gffnocache.rb in bio-gff3-0.8.4
- old
+ new
@@ -88,9 +88,10 @@
def parse
info "---- Digest DB and store data in mRNA Hash (NoCache)"
@count_ids = Counter.new # Count ids
@count_seqnames = Counter.new # Count seqnames
@componentlist = SeekRecList.new(@iter.fh) # Store containers, like genes, contigs
+ @orflist = SeekLinkedRecs.new # Store linked gene records
@mrnalist = SeekLinkedRecs.new # Store linked mRNA records
@cdslist = SeekLinkedRecs.new
@exonlist = SeekLinkedRecs.new
@sequencelist = {}
@unrecognized_features = {}