lib/bio/db/gff/gffinmemory.rb in bio-gff3-0.8.3 vs lib/bio/db/gff/gffinmemory.rb in bio-gff3-0.8.4
- old
+ new
@@ -28,9 +28,10 @@
def parse
info "---- Digest DB and store data in mRNA Hash"
@count_ids = Counter.new # Count ids
@count_seqnames = Counter.new # Count seqnames
@componentlist = {} # Store containers, like genes, contigs
+ @orflist = LinkedRecs.new
@mrnalist = LinkedRecs.new # Store linked mRNA records
@cdslist = LinkedRecs.new
@exonlist = LinkedRecs.new
@sequencelist = {}
@unrecognized_features = {}