Sha256: ff29db206ff8d6d459df50ec8f15d70ed8775046e52bd8261730b622e3a0f26a

Contents?: true

Size: 561 Bytes

Versions: 8

Compression:

Stored size: 561 Bytes

Contents

ben@u:~/git/finishm/spec/data/visualise/2_paired_end$ randomFasta.pl 300 >rand1.fa
ben@u:~/git/finishm/spec/data/visualise/2_paired_end$ randomFasta.pl 300 >rand2.fa
ben@u:~/git/finishm/spec/data/visualise/2_paired_end$ cat rand1.fa rand2.fa >with_gaps.fa

# Then modify with_gaps so that it is a concatenation of rand1 and rand2, with A in the middle, 
# then copy the whole thing and replace the A with a G

ben@u:~/git/finishm/spec/data/visualise/2_paired_end$ ~/git/sammy/sammy.pl -r with_gaps.fa -n 100 -i 300 -d 1 -c 0 |pigz >with_gaps.read_pairs.fa.gz

Version data entries

8 entries across 8 versions & 1 rubygems

Version Path
finishm-0.0.9 spec/data/visualise/2_paired_end/HOWTO_RECREATE.txt
finishm-0.0.8 spec/data/visualise/2_paired_end/HOWTO_RECREATE.txt
finishm-0.0.7 spec/data/visualise/2_paired_end/HOWTO_RECREATE.txt
finishm-0.0.6 spec/data/visualise/2_paired_end/HOWTO_RECREATE.txt
finishm-0.0.5 spec/data/visualise/2_paired_end/HOWTO_RECREATE.txt
finishm-0.0.4 spec/data/visualise/2_paired_end/HOWTO_RECREATE.txt
finishm-0.0.2 spec/data/visualise/2_paired_end/HOWTO_RECREATE.txt
finishm-0.0.1 spec/data/visualise/2_paired_end/HOWTO_RECREATE.txt