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Warning Text83ffff̙̙3f3fff3f3f33333f33333\`~MetadatajOrganism_SampleData_Calc_qATP_at_MumaxϞResults_calculations+wksowlv0wksowlv1wksowlv2ǿwksowlv3Kwksowlv4!wksowlv5wksowlv6Kwksowlv711 2 " wksowlv0;" wksowlv1;4" wksowlv2;" wksowlv3;" wksowlv4;" wksowlv5;" wksowlv6;=" wksowlv7;" q Asset Title UCalculation of qATP for assessment of maintenance and qATP at the maximal growth rateUploaderMartijn BekkerUploader SEEK IDProject SysMO-LABASSAY Assay SEEK ID Assay Title Assay_typeTechnology_type DescriptionkAssessment of qATP for three different lactic acid bacteria at two different pH's at various dilution ratesExperimentalistDateSOP Publication PMID:21097579Experimental_conditionsItemValue UnitStart_value (optional)End_value (optional)CommentsCulture growth ChemostatFACTORS_STUDIEDpH Dilution_rate1/h SD (optional) SAMPLE NameTreatments (Factors Studied)OrganismNCBI_IDStrainGenotype Phenotypeorganism/cell part DillutionRateNZ9000_aLactococus LactisNZ9000 Wild-type Whole Cell0.05-0.4NZ9010_aNZ9010v538_aEnterococcus_faecalisV538 V538ldh_aldhM49_aStreptococcus_pyogenesM49 0.05-0.15 M49ldh_aNZ9000_bLactococcus_lactisNZ9010_bv538_b V538ldh_bM49_b M49ldh_bSampleV538_aV538_bqATP calculated at mumaxh-1 mmol/gram dryweight cells/h$mmol/gram dryweight cells/h at =1.0#mmol/gram dryweight cells/h at maxL.lactis CalculationsUnitspH 6.5 Average slopeCrossing with Y-axisstdev of slopeStdev of crossingpH 7.5 E. faecalis S.pyogenes SUBCLASSES?ontology0N9activity7buffer> concentration> dilution_rate< dry_biomass?enzymeActivity; expressionLextracellular_concentration9gas_flow> growth_mediumLintracellular_concentration5mass'Nothing@optical_densityDoptical_density_60039pressureGspecific_concentration< temperature7volumeF> amplificationEby-product_formationCcatabolic_responseIcell_growth_optimisation: cell_sizeR!Comparative_genomic_hybridizationEcomparative_genomicsDcontinuousEnzymaticGdiscontinuousEnzymatic?DNA_sequencing?enzymaticAssayW&Extracellular_Metabolite_concentrationFflux_balance_analysis: fluxomicsJgene_expression_profilingW&genome-scale_enzyme_activity_profiling9genomics; genotyping> glucose_pulseEimmune_precipitation= innoculation> interactomicsW&Intracellular_Metabolite_ConcentrationElimited_media_growthIMetabolite_concentrationEmetabolite_profiling= metabolomics= metabonomicsFmethylation_profilingCmicroRNA_profilingT#organism_or_strain_characterisationPpost-translational_modification> primer_designLprotein-protein_interactionV%protein-protein_interaction_profilingMprotein_expression_profilingGprotein_identificationEprotein_purificationLprotein_structural_analysis; proteomics; reactomics5RNAi< single_cellJsmall-molecule_microarray> SNP_detectionFSubstrate_utilization< tiling_path?transcripomicsJtranscriptional_profilingHtranslational_profiling>6Batch:<W INDIVIDUALS87BaCell7COSMIC9KOSMOBAC6MOSES< Noisy-Strep7PSYSMO7ScaRAB; SilicoTryp7STREAM9SulfoSys5SUMO9SysmoLab< Translucent?C13C_radiolabelling@2-hybrid_systemG2D_gel_electrophoresisNAccelerator_Mass_SpectrometryHaffinity_chromatographyCAlgebraic_equationEbait_protein_tagging8bindingJcapillary_electrophoresisGchemostat_measurements= ChIP-on-chip?chromatography CultureGrowth= custom_Array@DNA_Methylation@electrophoresisPenzymatic_activity_measurements; Exon_array5FACS?flow_cytometry5FRAPCgas_chromatographyU$Gas_Chromatography_Mass_SpectrometryDgel_electrophoresis?gel_filtration5HPLC8imaging],Inductively_Coupled_Plasma_Mass_SpectrometryHinitial_rate_experiment\+Ion_Mobility_Spectrometry_Mass_SpectrometryPIsotope_Ratio_Mass_Spectrometry@Linear_equation_.liquid_chromatography-tandem_mass_spectrometryX'Liquid_chromatography_Mass_Spectrometry: MALDI_TOFBmass_SpectrometryGmathematical_modelType; microarrayAmiRNA_microarrayCmolecule_labelling4NMROOrdinary_differential_equationNPartial_differential_equation4PCRMprogressive_curve_experiment5qPCR8qRT-PCRFradioactive_labelling9SDS_PAGE: SELDI_TOFJsmall_molecule_microarray: SNP_arrayCstructural_methodsJsurface_plasmon_resonanceITandem_Mass_Spectrometry= tiling_array5UPLC9BBacillus_subtilisKClostridium_acetobutylicumFAEscherichia_coliCHPseudomonas_fluorescensCPseudomonas_putidaISaccharomyces_cerevisiaeIStreptococcus_pneumoniaeGHStreptomyces_coelicolorHSulfolobus_solfataricusCTrypanosoma_brucei01/12/2007 - 01/01/2010M B mmol/gram dryweight cellsU76aaxsdnd ! 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