Sha256: ee946d4767c5c53f0a0280851309045f281247286e48e7c516f6592527a17f46
Contents?: true
Size: 704 Bytes
Versions: 101
Compression:
Stored size: 704 Bytes
Contents
require 'rbbt'
require 'rbbt/resource'
module HPRD
extend Resource
self.subdir = "share/databases/HPRD"
HPRD.claim HPRD["BINARY_PROTEIN_PROTEIN_INTERACTIONS.txt"], :proc do
raise "File BINARY_PROTEIN_PROTEIN_INTERACTIONS.txt not found in '#{HPRD["BINARY_PROTEIN_PROTEIN_INTERACTIONS.txt"].find}', download manually from http://www.hprd.org/"
end
HPRD.claim HPRD.protein_protein, :proc do
tsv = HPRD["BINARY_PROTEIN_PROTEIN_INTERACTIONS.txt"].tsv
tsv.key_field = "Associated Gene Name 1"
tsv.fields = ["HPRD id 1","RefSeq Protein ID 1","Associated Gene Name 2","HPRD id 2","RefSeq Protein ID 2", "Experiment type", "PMID"]
tsv.namespace = "Hsa"
tsv.to_s
end
end
Version data entries
101 entries across 101 versions & 1 rubygems