module BioInterchange class GOXRef # Returns the link-out URI for objects of "Arabidopsis Genome Initiative". def self.AGI_LocusCode RDF::URI.new("http://arabidopsis.org/servlets/TairObject?type=locus&name=") end # Returns the link-out URI for objects of "PlasmoDB Plasmodium Genome Resource". def self.ApiDB_PlasmoDB RDF::URI.new("http://www.plasmodb.org/gene/") end # Returns the link-out URI for objects of "AraCyc metabolic pathway database for Arabidopsis thaliana". def self.AraCyc RDF::URI.new("http://www.arabidopsis.org:1555/ARA/NEW-IMAGE?type=NIL&object=") end # Returns the link-out URI for objects of "A Systematic Annotation Package for Community Analysis of Genomes". def self.ASAP RDF::URI.new("https://asap.ahabs.wisc.edu/annotation/php/feature_info.php?FeatureID=") end # Returns the link-out URI for objects of "Aspergillus Genome Database". def self.AspGD RDF::URI.new("http://www.aspergillusgenome.org/cgi-bin/locus.pl?dbid=") end # Returns the link-out URI for objects of "Aspergillus Genome Database". def self.AspGD_LOCUS RDF::URI.new("http://www.aspergillusgenome.org/cgi-bin/locus.pl?locus=") end # Returns the link-out URI for objects of "Aspergillus Genome Database". def self.AspGD_REF RDF::URI.new("http://www.aspergillusgenome.org/cgi-bin/reference/reference.pl?dbid=") end # Returns the link-out URI for objects of "Basic Formal Ontology". def self.BFO RDF::URI.new("http://purl.obolibrary.org/obo/BFO_") end # Returns the link-out URI for objects of "BioCyc collection of metabolic pathway databases". def self.BioCyc RDF::URI.new("http://biocyc.org/META/NEW-IMAGE?type=PATHWAY&object=") end # Returns the link-out URI for objects of "BioModels Database". def self.BIOMD RDF::URI.new("http://www.ebi.ac.uk/compneur-srv/biomodels-main/publ-model.do?mid=") end # Returns the link-out URI for objects of "BRENDA, The Comprehensive Enzyme Information System". def self.BRENDA RDF::URI.new("http://www.brenda-enzymes.info/php/result_flat.php4?ecno=") end # Returns the link-out URI for objects of "Magnaporthe grisea Database". def self.Broad_MGG RDF::URI.new("http://www.broad.mit.edu/annotation/genome/magnaporthe_grisea/GeneLocus.html?sp=S") end # Returns the link-out URI for objects of "Catalog of Fishes genus database". def self.CASGEN RDF::URI.new("http://research.calacademy.org/research/ichthyology/catalog/getname.asp?rank=Genus&id=") end # Returns the link-out URI for objects of "Catalog of Fishes publications database". def self.CASREF RDF::URI.new("http://research.calacademy.org/research/ichthyology/catalog/getref.asp?id=") end # Returns the link-out URI for objects of "Catalog of Fishes species database". def self.CASSPC RDF::URI.new("http://research.calacademy.org/research/ichthyology/catalog/getname.asp?rank=Species&id=1979") end # Returns the link-out URI for objects of "Conserved Domain Database at NCBI". def self.CDD RDF::URI.new("http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=") end # Returns the link-out URI for objects of "Candida Genome Database". def self.CGD RDF::URI.new("http://www.candidagenome.org/cgi-bin/locus.pl?dbid=") end # Returns the link-out URI for objects of "Candida Genome Database". def self.CGD_LOCUS RDF::URI.new("http://www.candidagenome.org/cgi-bin/locus.pl?locus=") end # Returns the link-out URI for objects of "Candida Genome Database". def self.CGD_REF RDF::URI.new("http://www.candidagenome.org/cgi-bin/reference/reference.pl?dbid=") end # Returns the link-out URI for objects of "Chemical Entities of Biological Interest". def self.CHEBI RDF::URI.new("http://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:") end # Returns the link-out URI for objects of "Cell Type Ontology". def self.CL RDF::URI.new("http://purl.obolibrary.org/obo/CL_") end # Returns the link-out URI for objects of "NCBI COG cluster". def self.COG_Cluster RDF::URI.new("http://www.ncbi.nlm.nih.gov/COG/new/release/cow.cgi?cog=") end # Returns the link-out URI for objects of "NCBI COG function". def self.COG_Function RDF::URI.new("http://www.ncbi.nlm.nih.gov/COG/grace/shokog.cgi?fun=") end # Returns the link-out URI for objects of "NCBI COG pathway". def self.COG_Pathway RDF::URI.new("http://www.ncbi.nlm.nih.gov/COG/new/release/coglist.cgi?pathw=") end # Returns the link-out URI for objects of "CORUM - the Comprehensive Resource of Mammalian protein complexes". def self.CORUM RDF::URI.new("http://mips.gsf.de/genre/proj/corum/complexdetails.html?id=") end # Returns the link-out URI for objects of "NCBI dbSNP". def self.dbSNP RDF::URI.new("http://www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi?rs=") end # Returns the link-out URI for objects of "DNA Databank of Japan". def self.DDBJ RDF::URI.new("http://arsa.ddbj.nig.ac.jp/arsa/ddbjSplSearch?KeyWord=") end # Returns the link-out URI for objects of "dictyBase". def self.dictyBase RDF::URI.new("http://dictybase.org/gene/") end # Returns the link-out URI for objects of "dictyBase". def self.dictyBase_gene_name RDF::URI.new("http://dictybase.org/gene/") end # Returns the link-out URI for objects of "dictyBase literature references". def self.dictyBase_REF RDF::URI.new("http://dictybase.org/db/cgi-bin/dictyBase/reference/reference.pl?refNo=") end # Returns the link-out URI for objects of "Digital Object Identifier". def self.DOI RDF::URI.new("http://dx.doi.org/DOI:") end # Returns the link-out URI for objects of "Enzyme Commission". def self.EC RDF::URI.new("http://www.expasy.org/enzyme/") end # Returns the link-out URI for objects of "EchoBASE post-genomic database for Escherichia coli". def self.EchoBASE RDF::URI.new("http://www.biolws1.york.ac.uk/echobase/Gene.cfm?recordID=") end # Returns the link-out URI for objects of "EcoGene Database of Escherichia coli Sequence and Function". def self.ECK RDF::URI.new("http://www.ecogene.org/geneInfo.php?eck_id=") end # Returns the link-out URI for objects of "Encyclopedia of E. coli metabolism". def self.EcoCyc RDF::URI.new("http://biocyc.org/ECOLI/NEW-IMAGE?type=PATHWAY&object=") end # Returns the link-out URI for objects of "Encyclopedia of E. coli metabolism". def self.EcoCyc_REF RDF::URI.new("http://biocyc.org/ECOLI/reference.html?type=CITATION-FRAME&object=") end # Returns the link-out URI for objects of "EcoGene Database of Escherichia coli Sequence and Function". def self.ECOGENE RDF::URI.new("http://www.ecogene.org/geneInfo.php?eg_id=") end # Returns the link-out URI for objects of "EMBL Nucleotide Sequence Database". def self.EMBL RDF::URI.new("http://www.ebi.ac.uk/cgi-bin/emblfetch?style=html&Submit=Go&id=") end # Returns the link-out URI for objects of "European Nucleotide Archive". def self.ENA RDF::URI.new("http://www.ebi.ac.uk/ena/data/view/") end # Returns the link-out URI for objects of "Ensembl database of automatically annotated genomic data". def self.ENSEMBL RDF::URI.new("http://www.ensembl.org/id/") end # Returns the link-out URI for objects of "Ensembl database of automatically annotated genomic data". def self.ENSEMBL_GeneID RDF::URI.new("http://www.ensembl.org/id/") end # Returns the link-out URI for objects of "Ensembl database of automatically annotated genomic data". def self.ENSEMBL_ProteinID RDF::URI.new("http://www.ensembl.org/id/") end # Returns the link-out URI for objects of "Ensembl database of automatically annotated genomic data". def self.ENSEMBL_TranscriptID RDF::URI.new("http://www.ensembl.org/id/") end # Returns the link-out URI for objects of "Swiss Institute of Bioinformatics enzyme database". def self.ENZYME RDF::URI.new("http://www.expasy.ch/cgi-bin/nicezyme.pl?") end # Returns the link-out URI for objects of "Drosophila gross anatomy". def self.FBbt RDF::URI.new("http://flybase.org/cgi-bin/fbcvq.html?query=FBbt:") end # Returns the link-out URI for objects of "Human Genome Database". def self.GDB RDF::URI.new("http://www.gdb.org/gdb-bin/genera/accno?accessionNum=GDB:") end # Returns the link-out URI for objects of "GenBank". def self.GenBank RDF::URI.new("http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=") end # Returns the link-out URI for objects of "Domain Architecture Classification". def self.Gene3D RDF::URI.new("http://gene3d.biochem.ucl.ac.uk/superfamily/?accession=") end # Returns the link-out URI for objects of "Glossina morsitans GeneDB". def self.GeneDB_Gmorsitans RDF::URI.new("http://www.genedb.org/genedb/Search?organism=glossina&name=") end # Returns the link-out URI for objects of "Leishmania major GeneDB". def self.GeneDB_Lmajor RDF::URI.new("http://www.genedb.org/genedb/Search?organism=leish&name=") end # Returns the link-out URI for objects of "Plasmodium falciparum GeneDB". def self.GeneDB_Pfalciparum RDF::URI.new("http://www.genedb.org/genedb/Search?organism=malaria&name=") end # Returns the link-out URI for objects of "Schizosaccharomyces pombe GeneDB". def self.GeneDB_Spombe RDF::URI.new("http://old.genedb.org/genedb/Search?organism=pombe&name=") end # Returns the link-out URI for objects of "Trypanosoma brucei GeneDB". def self.GeneDB_Tbrucei RDF::URI.new("http://www.genedb.org/genedb/Search?organism=tryp&name=") end # Returns the link-out URI for objects of "NCBI Gene Expression Omnibus". def self.GEO RDF::URI.new("http://www.ncbi.nlm.nih.gov/sites/GDSbrowser?acc=") end # Returns the link-out URI for objects of "Gene Ontology Database". def self.GO RDF::URI.new("http://amigo.geneontology.org/cgi-bin/amigo/term-details.cgi?term=GO:") end # Returns the link-out URI for objects of "Gene Ontology Database references". def self.GO_REF RDF::URI.new("http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:") end # Returns the link-out URI for objects of "Gene Ontology Normal Usage Tracking System (GONUTS)". def self.GONUTS RDF::URI.new("http://gowiki.tamu.edu/wiki/index.php/") end # Returns the link-out URI for objects of "Gramene: A Comparative Mapping Resource for Grains". def self.GR RDF::URI.new("http://www.gramene.org/db/searches/browser?search_type=All&RGN=on&query=") end # Returns the link-out URI for objects of "Gramene: A Comparative Mapping Resource for Grains". def self.GR_GENE RDF::URI.new("http://www.gramene.org/db/genes/search_gene?acc=") end # Returns the link-out URI for objects of "Gramene: A Comparative Mapping Resource for Grains". def self.GR_PROTEIN RDF::URI.new("http://www.gramene.org/db/protein/protein_search?acc=") end # Returns the link-out URI for objects of "Gramene: A Comparative Mapping Resource for Grains". def self.GR_QTL RDF::URI.new("http://www.gramene.org/db/qtl/qtl_display?qtl_accession_id=") end # Returns the link-out URI for objects of "Gramene: A Comparative Mapping Resource for Grains". def self.GR_REF RDF::URI.new("http://www.gramene.org/db/literature/pub_search?ref_id=") end # Returns the link-out URI for objects of "H-invitational Database". def self.H_invDB_cDNA RDF::URI.new("http://www.h-invitational.jp/hinv/spsoup/transcript_view?acc_id=") end # Returns the link-out URI for objects of "H-invitational Database". def self.H_invDB_locus RDF::URI.new("http://www.h-invitational.jp/hinv/spsoup/locus_view?hix_id=") end # Returns the link-out URI for objects of "High-quality Automated and Manual Annotation of microbial Proteomes". def self.HAMAP RDF::URI.new("http://us.expasy.org/unirules/") end # Returns the link-out URI for objects of "HUGO Gene Nomenclature Committee". def self.HGNC RDF::URI.new("http://www.genenames.org/data/hgnc_data.php?hgnc_id=HGNC:") end # Returns the link-out URI for objects of "HUGO Gene Nomenclature Committee". def self.HGNC_gene RDF::URI.new("http://www.genenames.org/data/hgnc_data.php?app_sym=") end # Returns the link-out URI for objects of "Human Protein Atlas tissue profile information". def self.HPA RDF::URI.new("http://www.proteinatlas.org/tissue_profile.php?antibody_id=") end # Returns the link-out URI for objects of "Human Protein Atlas antibody information". def self.HPA_antibody RDF::URI.new("http://www.proteinatlas.org/antibody_info.php?antibody_id=") end # Returns the link-out URI for objects of "Integrated Microbial Genomes; JGI web site for genome annotation". def self.IMG RDF::URI.new("http://img.jgi.doe.gov/cgi-bin/pub/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=") end # Returns the link-out URI for objects of "IntAct protein interaction database". def self.IntAct RDF::URI.new("http://www.ebi.ac.uk/intact/search/do/search?searchString=") end # Returns the link-out URI for objects of "InterPro database of protein domains and motifs". def self.InterPro RDF::URI.new("http://www.ebi.ac.uk/interpro/IEntry?ac=") end # Returns the link-out URI for objects of "International Standard Book Number". def self.ISBN RDF::URI.new("http://my.linkbaton.com/get?lbCC=q&nC=q&genre=book&item=") end # Returns the link-out URI for objects of "International Union of Pharmacology". def self.IUPHAR_GPCR RDF::URI.new("http://www.iuphar-db.org/DATABASE/FamilyMenuForward?familyId=") end # Returns the link-out URI for objects of "International Union of Pharmacology". def self.IUPHAR_RECEPTOR RDF::URI.new("http://www.iuphar-db.org/DATABASE/ObjectDisplayForward?objectId=") end # Returns the link-out URI for objects of "Comprehensive Microbial Resource at the J. Craig Venter Institute". def self.JCVI_CMR RDF::URI.new("http://cmr.jcvi.org/cgi-bin/CMR/shared/GenePage.cgi?locus=") end # Returns the link-out URI for objects of "Comprehensive Microbial Resource at the J. Craig Venter Institute". def self.JCVI_EGAD RDF::URI.new("http://cmr.jcvi.org/cgi-bin/CMR/EgadSearch.cgi?search_string=") end # Returns the link-out URI for objects of "Genome Properties database at the J. Craig Venter Institute". def self.JCVI_GenProp RDF::URI.new("http://cmr.jcvi.org/cgi-bin/CMR/shared/GenomePropDefinition.cgi?prop_acc=") end # Returns the link-out URI for objects of "Medicago truncatula genome database at the J. Craig Venter Institute ". def self.JCVI_Medtr RDF::URI.new("http://medicago.jcvi.org/cgi-bin/medicago/search/shared/ORF_infopage.cgi?orf=") end # Returns the link-out URI for objects of "TIGRFAMs HMM collection at the J. Craig Venter Institute". def self.JCVI_TIGRFAMS RDF::URI.new("http://search.jcvi.org/search?p&q=") end # Returns the link-out URI for objects of "Digital archive of scholarly articles". def self.JSTOR RDF::URI.new("http://www.jstor.org/stable/") end # Returns the link-out URI for objects of "KEGG Enzyme Database". def self.KEGG_ENZYME RDF::URI.new("http://www.genome.jp/dbget-bin/www_bget?ec:") end # Returns the link-out URI for objects of "KEGG LIGAND Database". def self.KEGG_LIGAND RDF::URI.new("http://www.genome.jp/dbget-bin/www_bget?cpd:") end # Returns the link-out URI for objects of "KEGG Pathways Database". def self.KEGG_PATHWAY RDF::URI.new("http://www.genome.jp/dbget-bin/www_bget?path:") end # Returns the link-out URI for objects of "KEGG Reaction Database". def self.KEGG_REACTION RDF::URI.new("http://www.genome.jp/dbget-bin/www_bget?rn:") end # Returns the link-out URI for objects of "LifeDB". def self.LIFEdb RDF::URI.new("http://www.dkfz.de/LIFEdb/LIFEdb.aspx?ID=") end # Returns the link-out URI for objects of "Adult Mouse Anatomical Dictionary". def self.MA RDF::URI.new("http://www.informatics.jax.org/searches/AMA.cgi?id=MA:") end # Returns the link-out URI for objects of "MaizeGDB". def self.MaizeGDB RDF::URI.new("http://www.maizegdb.org/cgi-bin/id_search.cgi?id=") end # Returns the link-out URI for objects of "MaizeGDB". def self.MaizeGDB_Locus RDF::URI.new("http://www.maizegdb.org/cgi-bin/displaylocusresults.cgi?term=") end # Returns the link-out URI for objects of "MEROPS peptidase database". def self.MEROPS RDF::URI.new("http://merops.sanger.ac.uk/cgi-bin/pepsum?mid=") end # Returns the link-out URI for objects of "MEROPS peptidase database". def self.MEROPS_fam RDF::URI.new("http://merops.sanger.ac.uk/cgi-bin/famsum?family=") end # Returns the link-out URI for objects of "Medical Subject Headings". def self.MeSH RDF::URI.new("http://www.nlm.nih.gov/cgi/mesh/2005/MB_cgi?mode=&term=") end # Returns the link-out URI for objects of "Metabolic Encyclopedia of metabolic and other pathways". def self.MetaCyc RDF::URI.new("http://biocyc.org/META/NEW-IMAGE?type=NIL&object=") end # Returns the link-out URI for objects of "Mouse Genome Informatics". def self.MGI RDF::URI.new("http://www.informatics.jax.org/accession/") end # Returns the link-out URI for objects of "MIPS Functional Catalogue". def self.MIPS_funcat RDF::URI.new("http://mips.gsf.de/cgi-bin/proj/funcatDB/search_advanced.pl?action=2&wert=") end # Returns the link-out URI for objects of "MGED Ontology". def self.MO RDF::URI.new("http://mged.sourceforge.net/ontologies/MGEDontology.php#") end # Returns the link-out URI for objects of "ModBase comprehensive Database of Comparative Protein Structure Models". def self.ModBase RDF::URI.new("http://salilab.org/modbase/searchbyid?databaseID=") end # Returns the link-out URI for objects of "Nottingham Arabidopsis Stock Centre Seeds Database". def self.NASC_code RDF::URI.new("http://seeds.nottingham.ac.uk/NASC/stockatidb.lasso?code=") end # Returns the link-out URI for objects of "NCBI Gene". def self.NCBI_Gene RDF::URI.new("http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Retrieve&db=gene&list_uids=") end # Returns the link-out URI for objects of "NCBI databases". def self.NCBI_gi RDF::URI.new("http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=") end # Returns the link-out URI for objects of "NCBI GenPept". def self.NCBI_GP RDF::URI.new("http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=") end # Returns the link-out URI for objects of "Neuroscience Information Framework standard ontology, subcellular hierarchy". def self.NIF_Subcellular RDF::URI.new("http://www.neurolex.org/wiki/") end # Returns the link-out URI for objects of "National Microbial Pathogen Data Resource". def self.NMPDR RDF::URI.new("http://www.nmpdr.org/linkin.cgi?id=") end # Returns the link-out URI for objects of "Mendelian Inheritance in Man". def self.OMIM RDF::URI.new("http://omim.org/entry/") end # Returns the link-out URI for objects of "Genome Annotation Tool (Agrobacterium tumefaciens C58); PAMGO Interest Group". def self.PAMGO_GAT RDF::URI.new("http://agro.vbi.vt.edu/public/servlet/GeneEdit?&Search=Search&level=2&genename=") end # Returns the link-out URI for objects of "Magnaporthe grisea database". def self.PAMGO_MGG RDF::URI.new("http://scotland.fgl.ncsu.edu/cgi-bin/adHocQuery.cgi?adHocQuery_dbName=smeng_goannotation&Action=Data&QueryName=Functional+Categorization+of+MGG+GO+Annotation&P_KeyWord=") end # Returns the link-out URI for objects of "Virginia Bioinformatics Institute Microbial Database". def self.PAMGO_VMD RDF::URI.new("http://vmd.vbi.vt.edu/cgi-bin/browse/go_detail.cgi?gene_id=") end # Returns the link-out URI for objects of "Protein ANalysis THrough Evolutionary Relationships". def self.PANTHER RDF::URI.new("http://pantree.org/node/annotationNode.jsp?id=") end # Returns the link-out URI for objects of "PathoSystems Resource Integration Center". def self.PATRIC RDF::URI.new("http://patric.vbi.vt.edu/gene/overview.php?fid=") end # Returns the link-out URI for objects of "Protein Data Bank". def self.PDB RDF::URI.new("http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=") end # Returns the link-out URI for objects of "Pfam database of protein families". def self.Pfam RDF::URI.new("http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?") end # Returns the link-out URI for objects of "Pharmacogenetics and Pharmacogenomics Knowledge Base". def self.PharmGKB RDF::URI.new("http://www.pharmgkb.org/do/serve?objId=") end # Returns the link-out URI for objects of "Protein Information Resource". def self.PIR RDF::URI.new("http://pir.georgetown.edu/cgi-bin/pirwww/nbrfget?uid=") end # Returns the link-out URI for objects of "PIR Superfamily Classification System". def self.PIRSF RDF::URI.new("http://pir.georgetown.edu/cgi-bin/ipcSF?id=") end # Returns the link-out URI for objects of "Pubmed Central". def self.PMCID RDF::URI.new("http://www.ncbi.nlm.nih.gov/sites/entrez?db=pmc&cmd=search&term=") end # Returns the link-out URI for objects of "PubMed". def self.PMID RDF::URI.new("http://www.ncbi.nlm.nih.gov/pubmed/") end # Returns the link-out URI for objects of "Plant Ontology Consortium Database". def self.PO RDF::URI.new("http://www.plantontology.org/amigo/go.cgi?action=query&view=query&search_constraint=terms&query=PO:") end # Returns the link-out URI for objects of "Plant Ontology custom references". def self.PO_REF RDF::URI.new("http://wiki.plantontology.org:8080/index.php/PO_REF:") end # Returns the link-out URI for objects of "PomBase". def self.PomBase RDF::URI.new("http://www.pombase.org/spombe/result/") end # Returns the link-out URI for objects of "Protein Ontology". def self.PR RDF::URI.new("http://www.proconsortium.org/cgi-bin/pro/entry_pro?id=PR:") end # Returns the link-out URI for objects of "PRINTS compendium of protein fingerprints". def self.PRINTS RDF::URI.new("http://www.bioinf.manchester.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false®expr=off&prints_accn=") end # Returns the link-out URI for objects of "ProDom protein domain families". def self.ProDom RDF::URI.new("http://prodom.prabi.fr/prodom/current/cgi-bin/request.pl?question=DBEN&query=") end # Returns the link-out URI for objects of "Prosite database of protein families and domains". def self.Prosite RDF::URI.new("http://www.expasy.ch/cgi-bin/prosite-search-ac?") end # Returns the link-out URI for objects of "Pseudomonas Genome Project". def self.PseudoCAP RDF::URI.new("http://v2.pseudomonas.com/getAnnotation.do?locusID=") end # Returns the link-out URI for objects of "Proteomics Standards Initiative protein modification ontology". def self.PSI_MOD RDF::URI.new("http://www.ebi.ac.uk/ontology-lookup/?termId=MOD:") end # Returns the link-out URI for objects of "NCBI PubChem database of bioassay records". def self.PubChem_BioAssay RDF::URI.new("http://pubchem.ncbi.nlm.nih.gov/assay/assay.cgi?aid=") end # Returns the link-out URI for objects of "NCBI PubChem database of chemical structures". def self.PubChem_Compound RDF::URI.new("http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?CMD=search&DB=pccompound&term=") end # Returns the link-out URI for objects of "NCBI PubChem database of chemical substances". def self.PubChem_Substance RDF::URI.new("http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?CMD=search&DB=pcsubstance&term=") end # Returns the link-out URI for objects of "Reactome - a curated knowledgebase of biological pathways". def self.Reactome RDF::URI.new("http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=") end # Returns the link-out URI for objects of "RefSeq". def self.RefSeq RDF::URI.new("http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=") end # Returns the link-out URI for objects of "RefSeq (Nucleic Acid)". def self.RefSeq_NA RDF::URI.new("http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=") end # Returns the link-out URI for objects of "RefSeq (Protein)". def self.RefSeq_Prot RDF::URI.new("http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=") end # Returns the link-out URI for objects of "Rfam database of RNA families". def self.Rfam RDF::URI.new("http://rfam.sanger.ac.uk/family/") end # Returns the link-out URI for objects of "Rat Genome Database". def self.RGD RDF::URI.new("http://rgd.mcw.edu/generalSearch/RgdSearch.jsp?quickSearch=1&searchKeyword=") end # Returns the link-out URI for objects of "Rhea, the Annotated Reactions Database". def self.RHEA RDF::URI.new("http://www.ebi.ac.uk/rhea/reaction.xhtml?id=") end # Returns the link-out URI for objects of "RNA Modification Database". def self.RNAmods RDF::URI.new("http://s59.cas.albany.edu/RNAmods/cgi-bin/rnashow.cgi?") end # Returns the link-out URI for objects of "OBO Relation Ontology Ontology". def self.RO RDF::URI.new("http://purl.obolibrary.org/obo/RO_") end # Returns the link-out URI for objects of "SABIO Reaction Kinetics". def self.SABIO_RK RDF::URI.new("http://sabio.villa-bosch.de/reacdetails.jsp?reactid=") end # Returns the link-out URI for objects of "The SEED;". def self.SEED RDF::URI.new("http://www.theseed.org/linkin.cgi?id=") end # Returns the link-out URI for objects of "Saccharomyces Genome Database". def self.SGD RDF::URI.new("http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=") end # Returns the link-out URI for objects of "Saccharomyces Genome Database". def self.SGD_LOCUS RDF::URI.new("http://db.yeastgenome.org/cgi-bin/locus.pl?locus=") end # Returns the link-out URI for objects of "Saccharomyces Genome Database". def self.SGD_REF RDF::URI.new("http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=") end # Returns the link-out URI for objects of "Sol Genomics Network". def self.SGN RDF::URI.new("http://www.sgn.cornell.edu/phenome/locus_display.pl?locus_id=") end # Returns the link-out URI for objects of "Sol Genomics Network". def self.SGN_ref RDF::URI.new("http://www.sgn.cornell.edu/chado/publication.pl?pub_id=") end # Returns the link-out URI for objects of "Simple Modular Architecture Research Tool". def self.SMART RDF::URI.new("http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=") end # Returns the link-out URI for objects of "Sequence Ontology". def self.SO RDF::URI.new("http://song.sourceforge.net/SOterm_tables.html#SO:") end # Returns the link-out URI for objects of "SUPERFAMILY protein annotation database". def self.SUPERFAMILY RDF::URI.new("http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/scop.cgi?ipid=SSF") end # Returns the link-out URI for objects of "UniProtKB/Swiss-Prot". def self.Swiss_Prot RDF::URI.new("http://www.uniprot.org/uniprot/") end # Returns the link-out URI for objects of "The Arabidopsis Information Resource". def self.TAIR RDF::URI.new("http://arabidopsis.org/servlets/TairObject?accession=") end # Returns the link-out URI for objects of "NCBI Taxonomy". def self.taxon RDF::URI.new("http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=") end # Returns the link-out URI for objects of "Transport Protein Database". def self.TC RDF::URI.new("http://www.tcdb.org/tcdb/index.php?tc=") end # Returns the link-out URI for objects of "Tetrahymena Genome Database". def self.TGD_LOCUS RDF::URI.new("http://db.ciliate.org/cgi-bin/locus.pl?locus=") end # Returns the link-out URI for objects of "Tetrahymena Genome Database". def self.TGD_REF RDF::URI.new("http://db.ciliate.org/cgi-bin/reference/reference.pl?dbid=") end # Returns the link-out URI for objects of "UniProtKB-TrEMBL protein sequence database". def self.TrEMBL RDF::URI.new("http://www.uniprot.org/uniprot/") end # Returns the link-out URI for objects of "Uber-anatomy ontology". def self.UBERON RDF::URI.new("http://purl.obolibrary.org/obo/UBERON_") end # Returns the link-out URI for objects of "University of Minnesota Biocatalysis/Biodegradation Database". def self.UM_BBD_enzymeID RDF::URI.new("http://umbbd.msi.umn.edu/servlets/pageservlet?ptype=ep&enzymeID=") end # Returns the link-out URI for objects of "University of Minnesota Biocatalysis/Biodegradation Database". def self.UM_BBD_reactionID RDF::URI.new("http://umbbd.msi.umn.edu/servlets/pageservlet?ptype=r&reacID=") end # Returns the link-out URI for objects of "University of Minnesota Biocatalysis/Biodegradation Database". def self.UM_BBD_ruleID RDF::URI.new("http://umbbd.msi.umn.edu/servlets/rule.jsp?rule=") end # Returns the link-out URI for objects of "UniMod". def self.UniMod RDF::URI.new("http://www.unimod.org/modifications_view.php?editid1=") end # Returns the link-out URI for objects of "UniProt Archive". def self.UniParc RDF::URI.new("http://www.uniprot.org/uniparc/") end # Returns the link-out URI for objects of "UniPathway". def self.UniPathway RDF::URI.new("http://www.grenoble.prabi.fr/obiwarehouse/unipathway/upa?upid=") end # Returns the link-out URI for objects of "Universal Protein Knowledgebase". def self.UniProtKB RDF::URI.new("http://www.uniprot.org/uniprot/") end # Returns the link-out URI for objects of "UniProt Knowledgebase keywords". def self.UniProtKB_KW RDF::URI.new("http://www.uniprot.org/keywords/") end # Returns the link-out URI for objects of "UniProt Knowledgebase Subcellular Location vocabulary". def self.UniProtKB_SubCell RDF::URI.new("http://www.uniprot.org/locations/") end # Returns the link-out URI for objects of "Viral Bioinformatics Resource Center". def self.VBRC RDF::URI.new("http://vbrc.org/query.asp?web_id=VBRC:") end # Returns the link-out URI for objects of "Vertebrate Genome Annotation database". def self.VEGA RDF::URI.new("http://vega.sanger.ac.uk/perl/searchview?species=all&idx=All&q=") end # Returns the link-out URI for objects of "Virginia Bioinformatics Institute Microbial Database". def self.VMD RDF::URI.new("http://vmd.vbi.vt.edu/cgi-bin/browse/browserDetail_new.cgi?gene_id=") end # Returns the link-out URI for objects of "WormBase database of nematode biology". def self.WB RDF::URI.new("http://www.wormbase.org/db/gene/gene?name=") end # Returns the link-out URI for objects of "WormBase database of nematode biology". def self.WB_REF RDF::URI.new("http://www.wormbase.org/db/misc/paper?name=") end # Returns the link-out URI for objects of "Wikipedia". def self.Wikipedia RDF::URI.new("http://en.wikipedia.org/wiki/") end # Returns the link-out URI for objects of "Wormpep database of proteins of C. elegans". def self.WP RDF::URI.new("http://www.wormbase.org/db/get?class=Protein;name=WP:") end # Returns the link-out URI for objects of "Zebrafish Information Network". def self.ZFIN RDF::URI.new("http://zfin.org/cgi-bin/ZFIN_jump?record=") end end end