Sha256: e59c02ac27cdde42ef54af616e63b840d2af497f913260ead05bc108717a902a

Contents?: true

Size: 1.35 KB

Versions: 14

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Stored size: 1.35 KB

Contents

/*
Copyright 2007, 2008 Daniel Zerbino (zerbino@ebi.ac.uk)

    This file is part of Velvet.

    Velvet is free software; you can redistribute it and/or modify
    it under the terms of the GNU General Public License as published by
    the Free Software Foundation; either version 2 of the License, or
    (at your option) any later version.

    Velvet is distributed in the hope that it will be useful,
    but WITHOUT ANY WARRANTY; without even the implied warranty of
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
    GNU General Public License for more details.

    You should have received a copy of the GNU General Public License
    along with Velvet; if not, write to the Free Software
    Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA

*/
#ifndef _Splay_H
#define _Splay_H

#include <stdio.h>

typedef struct splayNode_st SplayTree;

// Deallocates tree memory
void destroyAllSplayTrees();

// Finds occurrence of kmer in the tree
// If found, returns TRUE, and seqID and coordinate are accordingly modified
// If not, a new leaf is added to the tree, with the seqID and position data
boolean findOrInsertOccurenceInSplayTree(Kmer * kmer, IDnum * seqID,
					 Coordinate * position,
					 SplayTree ** T);

#ifdef _OPENMP
/* Initialises the per-thread RecycleBin array */
void initSplayTreeMemory(void);
#endif

#endif

Version data entries

14 entries across 14 versions & 2 rubygems

Version Path
finishm-0.0.9 ext/src/src/splay.h
bio-velvet_underground-0.3.1 ext/src/src/splay.h
finishm-0.0.8 ext/src/src/splay.h
finishm-0.0.7 ext/src/src/splay.h
finishm-0.0.6 ext/src/src/splay.h
finishm-0.0.5 ext/src/src/splay.h
finishm-0.0.4 ext/src/src/splay.h
finishm-0.0.2 ext/src/src/splay.h
finishm-0.0.1 ext/src/src/splay.h
bio-velvet_underground-0.3.0 ext/src/src/splay.h
bio-velvet_underground-0.2.1 ext/src/src/splay.h
bio-velvet_underground-0.2.0 ext/src/src/splay.h
bio-velvet_underground-0.1.0 ext/src/src/splay.h
bio-velvet_underground-0.0.1 ext/src/src/splay.h