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Versions: 29
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Stored size: 1.35 KB
Contents
class CodeRunner
require SCRIPT_FOLDER + '/system_modules/moab.rb'
module Archer
include Moab
def batch_script
raise "Please specify project" unless @project
(eputs "Warning: number of wall mins is not recommended (20, 60, 180, 360, 720 recomended)"; sleep 0.2) unless [20, 60, 180, 360, 720].include? @wall_mins.to_i
ppn_checks
hours, mins, secs = hours_minutes_seconds
<<EOF
#!/bin/bash --login
#PBS -N #{executable_name}.#{job_identifier}
#PBS -l select=#{nodes}
#PBS -l walltime=#{sprintf("%02d:%02d:%02d", hours, mins, secs)}
#{@project ? "#PBS -A #@project" : ""}
#{@queue ? "#PBS -q #@queue" : ""}
### start of jobscript
cd $PBS_O_WORKDIR
echo "workdir: $PBS_O_WORKDIR"
#{code_run_environment}
echo "Submitting #{nodes}x#{ppn} job on #{CodeRunner::SYS} for project #@project..."
EOF
end
def max_ppn
24
end
def mpi_prog
"aprun -n #{ppn*nodes}"
end
def get_run_status(job_no, current_status)
if use_launcher
return :Unknown
end
line = current_status.split(/\n/).grep(Regexp.new(job_no.to_s))[0]
unless line
return :Unknown
else
if line =~ /\sQ\s/
return :Queueing
elsif line =~ /\sR\s/
return :Running
elsif line =~ /\sH\s/
return :Queueing
elsif line =~ /\s[CE]\s/
@running=false
return :Unknown
else
ep 'line', line
raise 'Could not get run status'
end
end
end
end
end
Version data entries
29 entries across 29 versions & 1 rubygems