require File.expand_path(File.dirname(__FILE__) + '/spec_helper.rb') include ExampleWithGSL describe Distribution::Binomial do shared_examples_for 'binomial engine' do it 'should return correct pdf' do if @engine.respond_to? :pdf [10, 100, 1000].each do |n| [1.quo(4), 1.quo(2), 3.quo(4)].each do |pr| [0, 1, n / 2, n - 1].each do |x| exp = Math.binomial_coefficient(n, x) * pr**x * (1 - pr)**(n - x) obs = @engine.pdf(x, n, pr) expect(obs).to be_within(1e-5).of(exp), "For pdf(#{x},#{n},#{pr}) expected #{exp}, obtained #{obs}" end end end else skip("No #{@engine}.pdf") end end it_only_with_gsl 'should return correct cdf for n<=100' do if @engine.respond_to? :pdf [10, 100].each do |n| [0.25, 0.5, 0.75].each do |pr| [1, n / 2, n - 1].each do |x| exp = GSL::Cdf.binomial_P(x, pr, n) obs = @engine.cdf(x, n, pr) expect(exp).to be_within(1e-5).of(obs), "For cdf(#{x},#{n},#{pr}) expected #{exp}, obtained #{obs}" end end end else skip("No #{@engine}.cdf") end end end describe 'singleton' do before do @engine = Distribution::Binomial end it_should_behave_like 'binomial engine' it { expect(@engine).to respond_to(:exact_pdf) } it { pending('No exact_p_value') expect(@engine).to respond_to(:exact_p_value) } it 'exact_cdf should return same values as cdf for n=50' do pr = rand * 0.8 + 0.1 n = rand(10) + 10 [1, (n / 2).to_i, n - 1].each do |k| expect(@engine.exact_cdf(k, n, pr)).to be_within(1e-10).of(@engine.cdf(k, n, pr)) end end it 'exact_pdf should not return a Float if not float is used as parameter' do expect(@engine.exact_pdf(1, 1, 1)).to_not be_a(Float) expect(@engine.exact_pdf(16, 80, 1.quo(2))).to_not be_a(Float) end end describe Distribution::Binomial::Ruby_ do before do @engine = Distribution::Binomial::Ruby_ end it_should_behave_like 'binomial engine' it 'should return correct cdf for n>100' do [500, 1000].each do |n| [0.5, 0.6].each do |pr| [n / 2].each do |x| cdf = @engine.exact_cdf(x, n, pr) p_value = @engine.p_value(cdf, n, pr) msg = "For p_value(#{cdf},#{n},#{pr}) expected #{x}, obtained #{p_value}" expect(p_value).to eq(x), msg end end end end it 'should return correct p_value for n<=100' do pending("Can't calculate with precision x using p") [10, 100].each do |n| [0.25, 0.5, 0.75].each do |pr| [n / 2].each do |x| cdf = @engine.cdf(x, n, pr) p_value = @engine.p_value(cdf, n, pr) msg = "For p_value(#{cdf},#{n},#{pr}) expected #{x}, obtained #{p_value}" expect(p_value).to eq(x), msg end end end end end if Distribution.has_gsl? describe Distribution::Binomial::GSL_ do before do @engine = Distribution::Binomial::GSL_ end it_should_behave_like 'binomial engine' end end if Distribution.has_java? describe Distribution::Binomial::Java_ do before do @engine = Distribution::Binomial::Java_ end it_should_behave_like 'binomial engine' end end end