Sha256: d63c056d68510504b1b4b90803f86feee0ab5a87b0a0025e68a38e66a1a8550a
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Size: 755 Bytes
Versions: 25
Compression:
Stored size: 755 Bytes
Contents
require File.join(File.expand_path(File.dirname(__FILE__)), '../..', 'test_helper.rb')
require 'rbbt/matrix'
require 'rbbt/matrix/barcode'
class TestBarcode < Test::Unit::TestCase
def test_R_barcode
data = TSV.setup({}, :key_field => "Gene", :fields => %w(S1 S2 S3 S4 S5 S6) , :type => :list)
data["G1"] = [1,1,1,4,5,6]
data["G2"] = [1,6,1,6,1,6]
data["G3"] = [1,1,1,1,6,6]
data["G4"] = [6,6,1,1,1,1]
TmpFile.with_file(data.to_s) do |file|
m = RbbtMatrix.new file
m.barcode(file+'.barcode')
tsv = TSV.open(file+'.barcode')
assert tsv["G2"] = [0,1,0,1,0,1]
m.barcode_ruby(file+'.barcode_ruby')
tsv = TSV.open(file+'.barcode_ruby')
assert tsv["G2"] = [0,1,0,1,0,1]
end
end
end
Version data entries
25 entries across 25 versions & 1 rubygems