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Class: NEAT::Controller::NeatSettings — Documentation by YARD 0.8.7.3
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<span class="title">NeatSettings</span>
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<div class="clear"></div> </div> <iframe id="search_frame"></iframe> <div id="content"><h1>Class: NEAT::Controller::NeatSettings
</h1>
<dl class=“box”>
<dt class="r1">Inherits:</dt>
<dd class="r1">
<span class="inheritName"><span class='object_link'><a href="../NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></span>
<ul class="fullTree">
<li>Object</li>
<li class="next"><span class='object_link'><a href="../NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></li>
<li class="next">NEAT::Controller::NeatSettings</li>
</ul>
<a href="#" class="inheritanceTree">show all</a>
</dd>
<dt class="r2 last">Defined in:</dt>
<dd class="r2 last">lib/rubyneat/rubyneat.rb</dd>
</dl> <div class=“clear”></div>
<h2>Overview</h2><div class=“docstring”>
<div class="discussion">
<p>Various parameters affecting evolution. Based somewhat on the C version of NEAT. TODO not all of these parameters are implemented yet!!!</p>
</div>
</div> <div class=“tags”>
</div>
<h2>Instance Attribute Summary <small>(<a href="#" class="summary_toggle">collapse</a>)</small></h2>
<ul class="summary">
<li class="public ">
<span class="summary_signature">
<a href="#age_significance-instance_method" title="#age_significance (instance method)">- (Object) <strong>age_significance</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>based on the C version of NEAT.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#babies_stolen-instance_method" title="#babies_stolen (instance method)">- (Object) <strong>babies_stolen</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute babies_stolen.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#compatibility_threshold-instance_method" title="#compatibility_threshold (instance method)">- (Object) <strong>compatibility_threshold</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Species compatability threshold.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#disjoint_coefficient-instance_method" title="#disjoint_coefficient (instance method)">- (Object) <strong>disjoint_coefficient</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Speciation coffficient.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#dropoff_age-instance_method" title="#dropoff_age (instance method)">- (Object) <strong>dropoff_age</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Species Peality age for not making progress.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#end_sequence_at-instance_method" title="#end_sequence_at (instance method)">- (Object) <strong>end_sequence_at</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute end_sequence_at.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#evolved_substrate_switch-instance_method" title="#evolved_substrate_switch (instance method)">- (Object) <strong>evolved_substrate_switch</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Enable Evolved Substrate HyperNEAT.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#excess_coefficient-instance_method" title="#excess_coefficient (instance method)">- (Object) <strong>excess_coefficient</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Speciation coffficient.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#feature_selection_switch-instance_method" title="#feature_selection_switch (instance method)">- (Object) <strong>feature_selection_switch</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Enable FS-NEAT.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#fitness_cost_per_gene-instance_method" title="#fitness_cost_per_gene (instance method)">- (Object) <strong>fitness_cost_per_gene</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute fitness_cost_per_gene.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#fitness_cost_per_neuron-instance_method" title="#fitness_cost_per_neuron (instance method)">- (Object) <strong>fitness_cost_per_neuron</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>fitness costs, if given, use in the computation of fitness AFTER the overall fitness for the applied stimuli have been caclulated.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#hash_on_fitness-instance_method" title="#hash_on_fitness (instance method)">- (Object) <strong>hash_on_fitness</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Set to true to returned named parameters as hashes to the fitness function (the default is to do ordered arrays).</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#hyper_switch-instance_method" title="#hyper_switch (instance method)">- (Object) <strong>hyper_switch</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Enable HyperNEAT.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#interspecies_mate_rate-instance_method" title="#interspecies_mate_rate (instance method)">- (Object) <strong>interspecies_mate_rate</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Ratio of mating are actually interspecies.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#linktrait_mutation_sig-instance_method" title="#linktrait_mutation_sig (instance method)">- (Object) <strong>linktrait_mutation_sig</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute linktrait_mutation_sig.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mate_multipoint_avg_prob-instance_method" title="#mate_multipoint_avg_prob (instance method)">- (Object) <strong>mate_multipoint_avg_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mate_multipoint_avg_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mate_multipoint_prob-instance_method" title="#mate_multipoint_prob (instance method)">- (Object) <strong>mate_multipoint_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mate_multipoint_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mate_only_prob-instance_method" title="#mate_only_prob (instance method)">- (Object) <strong>mate_only_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mate_only_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mate_singlepoint_prob-instance_method" title="#mate_singlepoint_prob (instance method)">- (Object) <strong>mate_singlepoint_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mate_singlepoint_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#max_generations-instance_method" title="#max_generations (instance method)">- (Object) <strong>max_generations</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Maximum number of generations to run, if given.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#max_population_history-instance_method" title="#max_population_history (instance method)">- (Object) <strong>max_population_history</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Maximun number of populations to maintain in the history buffer.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#max_species-instance_method" title="#max_species (instance method)">- (Object) <strong>max_species</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Max target number of species (will result in the compatability_coeifficient being adjusted automatically.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_add_gene_prob-instance_method" title="#mutate_add_gene_prob (instance method)">- (Object) <strong>mutate_add_gene_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mutate_add_gene_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_add_neuron_prob-instance_method" title="#mutate_add_neuron_prob (instance method)">- (Object) <strong>mutate_add_neuron_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mutate_add_neuron_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_change_gene_weights_prob-instance_method" title="#mutate_change_gene_weights_prob (instance method)">- (Object) <strong>mutate_change_gene_weights_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>For gene weights perturbations and changes (complete overwrites).</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_change_gene_weights_sd-instance_method" title="#mutate_change_gene_weights_sd (instance method)">- (Object) <strong>mutate_change_gene_weights_sd</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>For gene weights perturbations and changes (complete overwrites).</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_gene_disable_prob-instance_method" title="#mutate_gene_disable_prob (instance method)">- (Object) <strong>mutate_gene_disable_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mutate_gene_disable_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_gene_reenable_prob-instance_method" title="#mutate_gene_reenable_prob (instance method)">- (Object) <strong>mutate_gene_reenable_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mutate_gene_reenable_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_gene_trait_prob-instance_method" title="#mutate_gene_trait_prob (instance method)">- (Object) <strong>mutate_gene_trait_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mutate_gene_trait_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_neuron_trait_prob-instance_method" title="#mutate_neuron_trait_prob (instance method)">- (Object) <strong>mutate_neuron_trait_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mutate_neuron_trait_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_only_prob-instance_method" title="#mutate_only_prob (instance method)">- (Object) <strong>mutate_only_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mutate_only_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_perturb_gene_weights_prob-instance_method" title="#mutate_perturb_gene_weights_prob (instance method)">- (Object) <strong>mutate_perturb_gene_weights_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>For gene weights perturbations and changes (complete overwrites).</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_perturb_gene_weights_sd-instance_method" title="#mutate_perturb_gene_weights_sd (instance method)">- (Object) <strong>mutate_perturb_gene_weights_sd</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>For gene weights perturbations and changes (complete overwrites).</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_random_trait_prob-instance_method" title="#mutate_random_trait_prob (instance method)">- (Object) <strong>mutate_random_trait_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mutate_random_trait_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutate_toggle_enable_prob-instance_method" title="#mutate_toggle_enable_prob (instance method)">- (Object) <strong>mutate_toggle_enable_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mutate_toggle_enable_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#mutdiff_coefficient-instance_method" title="#mutdiff_coefficient (instance method)">- (Object) <strong>mutdiff_coefficient</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute mutdiff_coefficient.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#neuron_trait_mut_sig-instance_method" title="#neuron_trait_mut_sig (instance method)">- (Object) <strong>neuron_trait_mut_sig</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute neuron_trait_mut_sig.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#newlink_tries-instance_method" title="#newlink_tries (instance method)">- (Object) <strong>newlink_tries</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute newlink_tries.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#population_size-instance_method" title="#population_size (instance method)">- (Object) <strong>population_size</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>If set, will start off at the specified size and grow to the bigger population size.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#print_every-instance_method" title="#print_every (instance method)">- (Object) <strong>print_every</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute print_every.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#real_time_switch-instance_method" title="#real_time_switch (instance method)">- (Object) <strong>real_time_switch</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Enable RT-NEAT, for gradual evolution suitable for games and other human-interactive systems.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#recur_only_prob-instance_method" title="#recur_only_prob (instance method)">- (Object) <strong>recur_only_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute recur_only_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#recur_prob-instance_method" title="#recur_prob (instance method)">- (Object) <strong>recur_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute recur_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#recurrency_switch-instance_method" title="#recurrency_switch (instance method)">- (Object) <strong>recurrency_switch</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>If true, allow for recurrent networks.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#smallest_species-instance_method" title="#smallest_species (instance method)">- (Object) <strong>smallest_species</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Species smallest population allowed (coalse smaller species into one).</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#start_population_size-instance_method" title="#start_population_size (instance method)">- (Object) <strong>start_population_size</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>If set, will start off at the specified size and grow to the bigger population size.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#start_sequence_at-instance_method" title="#start_sequence_at (instance method)">- (Object) <strong>start_sequence_at</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute start_sequence_at.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#survival_mininum_per_species-instance_method" title="#survival_mininum_per_species (instance method)">- (Object) <strong>survival_mininum_per_species</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute survival_mininum_per_species.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#survival_threshold-instance_method" title="#survival_threshold (instance method)">- (Object) <strong>survival_threshold</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>factor (0 to 1) of the top percentage of the species that's allowed to mate.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#trait_mutation_power-instance_method" title="#trait_mutation_power (instance method)">- (Object) <strong>trait_mutation_power</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute trait_mutation_power.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#trait_param_mut_prob-instance_method" title="#trait_param_mut_prob (instance method)">- (Object) <strong>trait_param_mut_prob</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute trait_param_mut_prob.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#weigh_mut_power-instance_method" title="#weigh_mut_power (instance method)">- (Object) <strong>weigh_mut_power</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Returns the value of attribute weigh_mut_power.</p> </div></span>
</li>
<li class="public ">
<span class="summary_signature">
<a href="#weight_coefficient-instance_method" title="#weight_coefficient (instance method)">- (Object) <strong>weight_coefficient</strong> </a>
</span>
<span class="summary_desc"><div class='inline'>
<p>Speciation coffficient.</p> </div></span>
</li>
</ul>
<h3 class="inherited">Attributes inherited from <span class='object_link'><a href="../NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></h3>
<p class="inherited"><span class='object_link'><a href="../NeatOb.html#controller-instance_method" title="NEAT::NeatOb#controller (method)">#controller</a></span>, <span class='object_link'><a href="../NeatOb.html#name-instance_method" title="NEAT::NeatOb#name (method)">#name</a></span></p>
<h2>
Instance Method Summary
<small>(<a href="#" class="summary_toggle">collapse</a>)</small>
</h2>
<ul class="summary">
<li class="public ">
<span class="summary_signature">
<a href="#initialize-instance_method" title="#initialize (instance method)">- (NeatSettings) <strong>initialize</strong> </a>
</span>
<span class="note title constructor">constructor</span>
<span class="summary_desc"><div class='inline'>
<p>Set up defaults for mandatory entries.</p> </div></span>
</li>
</ul> <h3 class="inherited">Methods inherited from <span class='object_link'><a href="../NeatOb.html" title="NEAT::NeatOb (class)">NeatOb</a></span></h3> <p class="inherited"><span class='object_link'><a href="../NeatOb.html#log-instance_method" title="NEAT::NeatOb#log (method)">#log</a></span>, <span class='object_link'><a href="../NeatOb.html#log-class_method" title="NEAT::NeatOb.log (method)">log</a></span>, <span class='object_link'><a href="../NeatOb.html#to_s-instance_method" title="NEAT::NeatOb#to_s (method)">#to_s</a></span></p> <div id="constructor_details" class="method_details_list"> <h2>Constructor Details</h2> <div class="method_details first"> <h3 class="signature first" id="initialize-instance_method"> - (<tt><span class='object_link'><a href="" title="NEAT::Controller::NeatSettings (class)">NeatSettings</a></span></tt>) <strong>initialize</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Set up defaults for mandatory entries.</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
318 319 320 321 322 323 324 325 326 327 328</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 318</span>
<span class='kw'>def</span> <span class='id identifier rubyid_initialize'>initialize</span>
<span class='kw'>super</span> <span class='ivar'>@start_sequence_at</span> <span class='op'>=</span> <span class='int'>0</span> <span class='ivar'>@end_sequence_at</span> <span class='op'>=</span> <span class='int'>100</span> <span class='ivar'>@max_generations</span> <span class='op'>=</span> <span class='int'>1000</span> <span class='comment'># Default operators
</span> <span class='ivar'>@evaluator</span> <span class='op'>=</span> <span class='const'>Evaluator</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span> <span class='kw'>self</span>
<span class='ivar'>@expressor</span> <span class='op'>=</span> <span class='const'>Expressor</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span> <span class='kw'>self</span> <span class='ivar'>@evolver</span> <span class='op'>=</span> <span class='const'>Evolver</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span> <span class='kw'>self</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
</div>
<div id="instance_attr_details" class="attr_details">
<h2>Instance Attribute Details</h2>
<span id="age_significance=-instance_method"></span>
<div class="method_details first">
<h3 class="signature first" id="age_significance-instance_method">
- (<tt>Object</tt>) <strong>age_significance</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>based on the C version of NEAT</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
217 218 219</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 217</span>
<span class='kw'>def</span> <span class='id identifier rubyid_age_significance'>age_significance</span>
<span class='ivar'>@age_significance</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="babies_stolen=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="babies_stolen-instance_method">
- (<tt>Object</tt>) <strong>babies_stolen</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute babies_stolen</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
218 219 220</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 218</span>
<span class='kw'>def</span> <span class='id identifier rubyid_babies_stolen'>babies_stolen</span>
<span class='ivar'>@babies_stolen</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="compatibility_threshold=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="compatibility_threshold-instance_method">
- (<tt>Object</tt>) <strong>compatibility_threshold</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Species compatability threshold</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
221 222 223</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 221</span>
<span class='kw'>def</span> <span class='id identifier rubyid_compatibility_threshold'>compatibility_threshold</span>
<span class='ivar'>@compatibility_threshold</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="disjoint_coefficient=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="disjoint_coefficient-instance_method">
- (<tt>Object</tt>) <strong>disjoint_coefficient</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Speciation coffficient</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
224 225 226</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 224</span>
<span class='kw'>def</span> <span class='id identifier rubyid_disjoint_coefficient'>disjoint_coefficient</span>
<span class='ivar'>@disjoint_coefficient</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="dropoff_age=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="dropoff_age-instance_method">
- (<tt>Object</tt>) <strong>dropoff_age</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Species Peality age for not making progress</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
231 232 233</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 231</span>
<span class='kw'>def</span> <span class='id identifier rubyid_dropoff_age'>dropoff_age</span>
<span class='ivar'>@dropoff_age</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="end_sequence_at=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="end_sequence_at-instance_method">
- (<tt>Object</tt>) <strong>end_sequence_at</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute end_sequence_at</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
283 284 285</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 283</span>
<span class='kw'>def</span> <span class='id identifier rubyid_end_sequence_at'>end_sequence_at</span>
<span class='ivar'>@end_sequence_at</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="evolved_substrate_switch=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="evolved_substrate_switch-instance_method">
- (<tt>Object</tt>) <strong>evolved_substrate_switch</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Enable Evolved Substrate HyperNEAT. Meaningless unless hyper_switch is also enabled.</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
308 309 310</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 308</span>
<span class='kw'>def</span> <span class='id identifier rubyid_evolved_substrate_switch'>evolved_substrate_switch</span>
<span class='ivar'>@evolved_substrate_switch</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="excess_coefficient=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="excess_coefficient-instance_method">
- (<tt>Object</tt>) <strong>excess_coefficient</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Speciation coffficient</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
224 225 226</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 224</span>
<span class='kw'>def</span> <span class='id identifier rubyid_excess_coefficient'>excess_coefficient</span>
<span class='ivar'>@excess_coefficient</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="feature_selection_switch=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="feature_selection_switch-instance_method">
- (<tt>Object</tt>) <strong>feature_selection_switch</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Enable FS-NEAT</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
299 300 301</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 299</span>
<span class='kw'>def</span> <span class='id identifier rubyid_feature_selection_switch'>feature_selection_switch</span>
<span class='ivar'>@feature_selection_switch</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="fitness_cost_per_gene=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="fitness_cost_per_gene-instance_method">
- (<tt>Object</tt>) <strong>fitness_cost_per_gene</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute fitness_cost_per_gene</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
277 278 279</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 277</span>
<span class='kw'>def</span> <span class='id identifier rubyid_fitness_cost_per_gene'>fitness_cost_per_gene</span>
<span class='ivar'>@fitness_cost_per_gene</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="fitness_cost_per_neuron=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="fitness_cost_per_neuron-instance_method">
- (<tt>Object</tt>) <strong>fitness_cost_per_neuron</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>fitness costs, if given, use in the computation of fitness AFTER the overall fitness for the applied stimuli have been caclulated.</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
276 277 278</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 276</span>
<span class='kw'>def</span> <span class='id identifier rubyid_fitness_cost_per_neuron'>fitness_cost_per_neuron</span>
<span class='ivar'>@fitness_cost_per_neuron</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="hash_on_fitness=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="hash_on_fitness-instance_method">
- (<tt>Object</tt>) <strong>hash_on_fitness</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Set to true to returned named parameters as hashes to the fitness function (the default is to do ordered arrays)</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
214 215 216</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 214</span>
<span class='kw'>def</span> <span class='id identifier rubyid_hash_on_fitness'>hash_on_fitness</span>
<span class='ivar'>@hash_on_fitness</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="hyper_switch=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="hyper_switch-instance_method">
- (<tt>Object</tt>) <strong>hyper_switch</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Enable HyperNEAT. This will result in the critters being interpreted as CPPNs for substrate weights. Additional setup will be necessary.</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
304 305 306</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 304</span>
<span class='kw'>def</span> <span class='id identifier rubyid_hyper_switch'>hyper_switch</span>
<span class='ivar'>@hyper_switch</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="interspecies_mate_rate=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="interspecies_mate_rate-instance_method">
- (<tt>Object</tt>) <strong>interspecies_mate_rate</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Ratio of mating are actually interspecies</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
237 238 239</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 237</span>
<span class='kw'>def</span> <span class='id identifier rubyid_interspecies_mate_rate'>interspecies_mate_rate</span>
<span class='ivar'>@interspecies_mate_rate</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="linktrait_mutation_sig=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="linktrait_mutation_sig-instance_method">
- (<tt>Object</tt>) <strong>linktrait_mutation_sig</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute linktrait_mutation_sig</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
239 240 241</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 239</span>
<span class='kw'>def</span> <span class='id identifier rubyid_linktrait_mutation_sig'>linktrait_mutation_sig</span>
<span class='ivar'>@linktrait_mutation_sig</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mate_multipoint_avg_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mate_multipoint_avg_prob-instance_method">
- (<tt>Object</tt>) <strong>mate_multipoint_avg_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mate_multipoint_avg_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
240 241 242</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 240</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mate_multipoint_avg_prob'>mate_multipoint_avg_prob</span>
<span class='ivar'>@mate_multipoint_avg_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mate_multipoint_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mate_multipoint_prob-instance_method">
- (<tt>Object</tt>) <strong>mate_multipoint_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mate_multipoint_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
241 242 243</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 241</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mate_multipoint_prob'>mate_multipoint_prob</span>
<span class='ivar'>@mate_multipoint_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mate_only_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mate_only_prob-instance_method">
- (<tt>Object</tt>) <strong>mate_only_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mate_only_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
242 243 244</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 242</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mate_only_prob'>mate_only_prob</span>
<span class='ivar'>@mate_only_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mate_singlepoint_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mate_singlepoint_prob-instance_method">
- (<tt>Object</tt>) <strong>mate_singlepoint_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mate_singlepoint_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
243 244 245</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 243</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mate_singlepoint_prob'>mate_singlepoint_prob</span>
<span class='ivar'>@mate_singlepoint_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="max_generations=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="max_generations-instance_method">
- (<tt>Object</tt>) <strong>max_generations</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Maximum number of generations to run, if given.</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
246 247 248</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 246</span>
<span class='kw'>def</span> <span class='id identifier rubyid_max_generations'>max_generations</span>
<span class='ivar'>@max_generations</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="max_population_history=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="max_population_history-instance_method">
- (<tt>Object</tt>) <strong>max_population_history</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Maximun number of populations to maintain in the history buffer.</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
249 250 251</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 249</span>
<span class='kw'>def</span> <span class='id identifier rubyid_max_population_history'>max_population_history</span>
<span class='ivar'>@max_population_history</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="max_species=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="max_species-instance_method">
- (<tt>Object</tt>) <strong>max_species</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Max target number of species (will result in the compatability_coeifficient being adjusted automatically</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
228 229 230</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 228</span>
<span class='kw'>def</span> <span class='id identifier rubyid_max_species'>max_species</span>
<span class='ivar'>@max_species</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_add_gene_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_add_gene_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_add_gene_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mutate_add_gene_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
251 252 253</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 251</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_add_gene_prob'>mutate_add_gene_prob</span>
<span class='ivar'>@mutate_add_gene_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_add_neuron_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_add_neuron_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_add_neuron_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mutate_add_neuron_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
252 253 254</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 252</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_add_neuron_prob'>mutate_add_neuron_prob</span>
<span class='ivar'>@mutate_add_neuron_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_change_gene_weights_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_change_gene_weights_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_change_gene_weights_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>For gene weights perturbations and changes (complete overwrites)</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
260 261 262</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 260</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_change_gene_weights_prob'>mutate_change_gene_weights_prob</span>
<span class='ivar'>@mutate_change_gene_weights_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_change_gene_weights_sd=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_change_gene_weights_sd-instance_method">
- (<tt>Object</tt>) <strong>mutate_change_gene_weights_sd</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>For gene weights perturbations and changes (complete overwrites)</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
260 261 262</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 260</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_change_gene_weights_sd'>mutate_change_gene_weights_sd</span>
<span class='ivar'>@mutate_change_gene_weights_sd</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_gene_disable_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_gene_disable_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_gene_disable_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mutate_gene_disable_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
254 255 256</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 254</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_gene_disable_prob'>mutate_gene_disable_prob</span>
<span class='ivar'>@mutate_gene_disable_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_gene_reenable_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_gene_reenable_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_gene_reenable_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mutate_gene_reenable_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
255 256 257</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 255</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_gene_reenable_prob'>mutate_gene_reenable_prob</span>
<span class='ivar'>@mutate_gene_reenable_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_gene_trait_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_gene_trait_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_gene_trait_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mutate_gene_trait_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
257 258 259</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 257</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_gene_trait_prob'>mutate_gene_trait_prob</span>
<span class='ivar'>@mutate_gene_trait_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_neuron_trait_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_neuron_trait_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_neuron_trait_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mutate_neuron_trait_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
265 266 267</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 265</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_neuron_trait_prob'>mutate_neuron_trait_prob</span>
<span class='ivar'>@mutate_neuron_trait_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_only_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_only_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_only_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mutate_only_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
266 267 268</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 266</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_only_prob'>mutate_only_prob</span>
<span class='ivar'>@mutate_only_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_perturb_gene_weights_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_perturb_gene_weights_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_perturb_gene_weights_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>For gene weights perturbations and changes (complete overwrites)</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
260 261 262</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 260</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_perturb_gene_weights_prob'>mutate_perturb_gene_weights_prob</span>
<span class='ivar'>@mutate_perturb_gene_weights_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_perturb_gene_weights_sd=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_perturb_gene_weights_sd-instance_method">
- (<tt>Object</tt>) <strong>mutate_perturb_gene_weights_sd</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>For gene weights perturbations and changes (complete overwrites)</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
260 261 262</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 260</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_perturb_gene_weights_sd'>mutate_perturb_gene_weights_sd</span>
<span class='ivar'>@mutate_perturb_gene_weights_sd</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_random_trait_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_random_trait_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_random_trait_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mutate_random_trait_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
267 268 269</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 267</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_random_trait_prob'>mutate_random_trait_prob</span>
<span class='ivar'>@mutate_random_trait_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutate_toggle_enable_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutate_toggle_enable_prob-instance_method">
- (<tt>Object</tt>) <strong>mutate_toggle_enable_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mutate_toggle_enable_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
268 269 270</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 268</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutate_toggle_enable_prob'>mutate_toggle_enable_prob</span>
<span class='ivar'>@mutate_toggle_enable_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="mutdiff_coefficient=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="mutdiff_coefficient-instance_method">
- (<tt>Object</tt>) <strong>mutdiff_coefficient</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute mutdiff_coefficient</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
269 270 271</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 269</span>
<span class='kw'>def</span> <span class='id identifier rubyid_mutdiff_coefficient'>mutdiff_coefficient</span>
<span class='ivar'>@mutdiff_coefficient</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="neuron_trait_mut_sig=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="neuron_trait_mut_sig-instance_method">
- (<tt>Object</tt>) <strong>neuron_trait_mut_sig</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute neuron_trait_mut_sig</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
271 272 273</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 271</span>
<span class='kw'>def</span> <span class='id identifier rubyid_neuron_trait_mut_sig'>neuron_trait_mut_sig</span>
<span class='ivar'>@neuron_trait_mut_sig</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="newlink_tries=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="newlink_tries-instance_method">
- (<tt>Object</tt>) <strong>newlink_tries</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute newlink_tries</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
270 271 272</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 270</span>
<span class='kw'>def</span> <span class='id identifier rubyid_newlink_tries'>newlink_tries</span>
<span class='ivar'>@newlink_tries</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="population_size=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="population_size-instance_method">
- (<tt>Object</tt>) <strong>population_size</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>If set, will start off at the specified size and grow to the bigger population size</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
281 282 283</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 281</span>
<span class='kw'>def</span> <span class='id identifier rubyid_population_size'>population_size</span>
<span class='ivar'>@population_size</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="print_every=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="print_every-instance_method">
- (<tt>Object</tt>) <strong>print_every</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute print_every</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
285 286 287</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 285</span>
<span class='kw'>def</span> <span class='id identifier rubyid_print_every'>print_every</span>
<span class='ivar'>@print_every</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="real_time_switch=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="real_time_switch-instance_method">
- (<tt>Object</tt>) <strong>real_time_switch</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Enable RT-NEAT, for gradual evolution suitable for games and other human-interactive systems.</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
312 313 314</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 312</span>
<span class='kw'>def</span> <span class='id identifier rubyid_real_time_switch'>real_time_switch</span>
<span class='ivar'>@real_time_switch</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="recur_only_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="recur_only_prob-instance_method">
- (<tt>Object</tt>) <strong>recur_only_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute recur_only_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
286 287 288</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 286</span>
<span class='kw'>def</span> <span class='id identifier rubyid_recur_only_prob'>recur_only_prob</span>
<span class='ivar'>@recur_only_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="recur_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="recur_prob-instance_method">
- (<tt>Object</tt>) <strong>recur_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute recur_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
287 288 289</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 287</span>
<span class='kw'>def</span> <span class='id identifier rubyid_recur_prob'>recur_prob</span>
<span class='ivar'>@recur_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="recurrency_switch=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="recurrency_switch-instance_method">
- (<tt>Object</tt>) <strong>recurrency_switch</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>If true, allow for recurrent networks.</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
315 316 317</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 315</span>
<span class='kw'>def</span> <span class='id identifier rubyid_recurrency_switch'>recurrency_switch</span>
<span class='ivar'>@recurrency_switch</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="smallest_species=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="smallest_species-instance_method">
- (<tt>Object</tt>) <strong>smallest_species</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Species smallest population allowed (coalse smaller species into one)</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
234 235 236</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 234</span>
<span class='kw'>def</span> <span class='id identifier rubyid_smallest_species'>smallest_species</span>
<span class='ivar'>@smallest_species</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="start_population_size=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="start_population_size-instance_method">
- (<tt>Object</tt>) <strong>start_population_size</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>If set, will start off at the specified size and grow to the bigger population size</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
281 282 283</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 281</span>
<span class='kw'>def</span> <span class='id identifier rubyid_start_population_size'>start_population_size</span>
<span class='ivar'>@start_population_size</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="start_sequence_at=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="start_sequence_at-instance_method">
- (<tt>Object</tt>) <strong>start_sequence_at</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute start_sequence_at</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
283 284 285</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 283</span>
<span class='kw'>def</span> <span class='id identifier rubyid_start_sequence_at'>start_sequence_at</span>
<span class='ivar'>@start_sequence_at</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="survival_mininum_per_species=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="survival_mininum_per_species-instance_method">
- (<tt>Object</tt>) <strong>survival_mininum_per_species</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute survival_mininum_per_species</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
292 293 294</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 292</span>
<span class='kw'>def</span> <span class='id identifier rubyid_survival_mininum_per_species'>survival_mininum_per_species</span>
<span class='ivar'>@survival_mininum_per_species</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="survival_threshold=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="survival_threshold-instance_method">
- (<tt>Object</tt>) <strong>survival_threshold</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>factor (0 to 1) of the top percentage of the species that's allowed to mate.</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
291 292 293</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 291</span>
<span class='kw'>def</span> <span class='id identifier rubyid_survival_threshold'>survival_threshold</span>
<span class='ivar'>@survival_threshold</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="trait_mutation_power=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="trait_mutation_power-instance_method">
- (<tt>Object</tt>) <strong>trait_mutation_power</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute trait_mutation_power</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
294 295 296</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 294</span>
<span class='kw'>def</span> <span class='id identifier rubyid_trait_mutation_power'>trait_mutation_power</span>
<span class='ivar'>@trait_mutation_power</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="trait_param_mut_prob=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="trait_param_mut_prob-instance_method">
- (<tt>Object</tt>) <strong>trait_param_mut_prob</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute trait_param_mut_prob</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
295 296 297</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 295</span>
<span class='kw'>def</span> <span class='id identifier rubyid_trait_param_mut_prob'>trait_param_mut_prob</span>
<span class='ivar'>@trait_param_mut_prob</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="weigh_mut_power=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="weigh_mut_power-instance_method">
- (<tt>Object</tt>) <strong>weigh_mut_power</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Returns the value of attribute weigh_mut_power</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
296 297 298</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 296</span>
<span class='kw'>def</span> <span class='id identifier rubyid_weigh_mut_power'>weigh_mut_power</span>
<span class='ivar'>@weigh_mut_power</span>
<span class='kw'>end</span></pre>
</td> </tr>
</table> </div>
<span id="weight_coefficient=-instance_method"></span>
<div class="method_details ">
<h3 class="signature " id="weight_coefficient-instance_method">
- (<tt>Object</tt>) <strong>weight_coefficient</strong>
</h3><div class=“docstring”>
<div class="discussion">
<p>Speciation coffficient</p>
</div>
</div> <div class=“tags”>
</div><table class=“source_code”>
<tr>
<td>
<pre class="lines">
224 225 226</pre>
</td> <td> <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 224</span>
<span class='kw'>def</span> <span class='id identifier rubyid_weight_coefficient'>weight_coefficient</span>
<span class='ivar'>@weight_coefficient</span>
<span class='kw'>end</span></pre>
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<div id="footer"> Generated on Sun Mar 16 16:36:52 2014 by <a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a> 0.8.7.3 (ruby-2.1.1).
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