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Contents
require 'helper_spec'
require 'generators/stats_job_generator'
describe "StatsJobGenerator creates a Stats Job Driver Spec" do
before(:all) do
@subid = 'mrt00000'
@scans = YAML.load_file(File.join(File.dirname(__FILE__), '..', 'fixtures', 'valid_scans.yaml'))
rootdir = Pathname.new(File.join(File.dirname(__FILE__), '..', '..')).realpath.to_s
@valid_stats_job_spec = {
"step"=>"stats",
"responses"=> {
"logfiles" => ["mrt00000_abc_01012010_faces3_recognitionB.txt", "mrt00000_abc_01012010_faces3_recognitionA.txt"],
"directory"=> File.join($MRI_DATA, 'responses')
},
"conditions"=> ["new_correct", "new_incorrect", "old_correct", "old_incorrect"],
"regressorsfiles"=> ["rp_amrt00000_EPI-fMRI-Task1.txt", "rp_amrt00000_EPI-fMRI-Task2.txt"],
"bold_reps"=>[164, 164]
}
@valid_options = {
'conditions' => ['new_correct', 'new_incorrect', 'old_correct', 'old_incorrect'],
'subid' => @subid,
'responses_dir' => File.join($MRI_DATA, 'responses'),
'scans' => @scans
}
end
it "should create a valid job spec with no custom method" do
stats_job_spec = StatsJobGenerator.new(@valid_options).build
stats_job_spec.should == @valid_stats_job_spec
end
it "should create a valid job spec with a custom method defined" do
valid_stats_job_spec = @valid_stats_job_spec.dup
valid_stats_job_spec['method'] = 'Merit220Preprocess'
stats_job_spec = StatsJobGenerator.new(@valid_options.merge({'method' => 'Merit220Preprocess'})).build
stats_job_spec.should == valid_stats_job_spec
end
it "should raise a DriverConfigError if required keys are not specified." do
missing_options = ['subid', 'scans', 'conditions'].collect do |key|
@valid_options.dup.reject {|k,v| key == k }
end
missing_options.each do |options|
lambda { StatsJobGenerator.new(options).build }.should raise_error DriverConfigError
end
end
end
Version data entries
10 entries across 10 versions & 1 rubygems