require "seqtrim_action"

########################################################
# Author: Almudena Bocinos Rioboo                      
# 
# Defines the main methods that are necessary to execute Plugin1                                                     
# Inherit: Plugin
########################################################

class ActionLinker < SeqtrimAction
      
   def initialize(start_pos,end_pos)
     super(start_pos,end_pos)    
     @cut =false
   end

  # def apply_to(seq)
  #  
  #    # seq.seq_fasta = seq.seq_fasta.slice(start_pos,end_pos)
  #    $LOG.debug " Applying #{self.class} to seq #{seq.seq_name} . BEGIN: #{@start_pos}   END: #{@end_pos}  " 
  #  
  #  end    

def apply_decoration(char)
  return char.underline
  
end       


end