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Contents
require File.join(File.expand_path(File.dirname(__FILE__)), '../..', 'test_helper.rb') require 'rbbt/mutation/sift' class TestSIFT < Test::Unit::TestCase def test_predict_aminoacid_mutation accession = "NP_001008502" mutation = "Q554P" assert_equal "TOLERATED", SIFT.predict_aminoacid_mutation(accession, mutation)[3] end def test_predict_aminoacid_mutation_batch accession = "NP_001008502" mutation = "Q554P" assert_equal "TOLERATED", SIFT.predict_aminoacid_mutation_batch( [[accession, mutation]]).first[3] end def test_predict ensp = "ENSP00000224605" mutation = "A63T" assert_equal "TOLERATED", SIFT.predict( [[ensp, mutation] * ":"]).values.first["Prediction"] end def test_chunked_predict ensp = "ENSP00000224605" mutation = "A63T" assert_equal "TOLERATED", SIFT.chunked_predict( [[ensp, mutation] * ":"] * 2000).values.first["Prediction"] end end
Version data entries
7 entries across 7 versions & 1 rubygems