Sha256: cca0ebc4087ddf524e47f4da6517ffbbd8145a23c3801e821680d9d46caeb25f
Contents?: true
Size: 733 Bytes
Versions: 664
Compression:
Stored size: 733 Bytes
Contents
require File.expand_path(File.dirname(__FILE__) + '/../../../test_helper')
require 'rbbt/persist'
require 'rbbt/annotations'
require 'rbbt/util/tmpfile'
require 'test/unit'
module TestAnnotation
extend Annotation
self.annotation :test_annotation
end
class TestPersistTSVLevelDB < Test::Unit::TestCase
if Persist.respond_to? :open_leveldb
def test_organism
require 'rbbt/sources/organism'
TmpFile.with_file do |tmp_file|
tsv = Organism.identifiers("Hsa").tsv :key_field => "Associated Gene Name", :fields => ["Ensembl Gene ID"], :type => :single, :persist => true, :persist_engine => "LevelDB", :persist_dir => tmp_file
assert_equal "ENSG00000141510", tsv["TP53"]
end
end
end
end
Version data entries
664 entries across 664 versions & 1 rubygems