Sha256: c589f467a87c130b689c95c20c1a1f9b11618c3593feb657fa420d691ca6586b
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Versions: 15
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Stored size: 1.24 KB
Contents
module Inferno
module Terminology
module Tasks
class ExpandValueSetToFile
attr_reader :filename, :type, :value_set_url
def initialize(vs:, filename:, type:) # rubocop:disable Naming/MethodParameterName
@value_set_url = vs
@filename = filename
@type = type
end
def run
# JSON is a special case, because we need to add codes from valuesets from several versions
# We accomplish this by collecting and merging codes from each version
# Before writing the JSON to a file at the end
end_vs = nil if type == 'json'
%w[2019 2020 2021].each do |version|
Loader.register_umls_db File.join(TEMP_DIR, version, 'umls.db')
Loader.load_value_sets_from_directory(PACKAGE_DIR, true)
vs = Repositories::ValueSets.new.find(value_set_url)
if type == 'json'
end_vs ||= vs
end_vs.value_set.merge vs.value_set
else
Loader.save_to_file(vs.valueset, filename, type.to_sym)
end
end
File.open("#{filename}.json", 'wb') { |f| f << end_vs.expansion_as_fhir_valueset.to_json } if type == 'json'
end
end
end
end
end
Version data entries
15 entries across 15 versions & 1 rubygems