require 'spec_helper'

describe Bolognese::Metadata, vcr: true do
  context "write metadata as bibtex" do
    it "with data citation" do
      input = "10.7554/eLife.01567"
      subject = Bolognese::Metadata.new(input: input, from: "crossref")
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("article")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.7554/elife.01567")
      expect(bibtex[:doi]).to eq("10.7554/elife.01567")
      expect(bibtex[:url]).to eq("https://elifesciences.org/articles/01567")
      expect(bibtex[:title]).to eq("Automated quantitative histology reveals vascular morphodynamics during Arabidopsis hypocotyl secondary growth")
      expect(bibtex[:author]).to eq("Sankar, Martial and Nieminen, Kaisa and Ragni, Laura and Xenarios, Ioannis and Hardtke, Christian S")
      expect(bibtex[:journal]).to eq("eLife")
      expect(bibtex[:year]).to eq("2014")
    end

    it "with pages" do
      input = "https://doi.org/10.1155/2012/291294"
      subject = Bolognese::Metadata.new(input: input, from: "crossref")
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("article")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.1155/2012/291294")
      expect(bibtex[:doi]).to eq("10.1155/2012/291294")
      expect(bibtex[:url]).to eq("http://www.hindawi.com/journals/pm/2012/291294/")
      expect(bibtex[:title]).to eq("Delineating a Retesting Zone Using Receiver Operating Characteristic Analysis on Serial QuantiFERON Tuberculosis Test Results in US Healthcare Workers")
      expect(bibtex[:author]).to eq("Thanassi, Wendy and Noda, Art and Hernandez, Beatriz and Newell, Jeffery and Terpeluk, Paul and Marder, David and Yesavage, Jerome A.")
      expect(bibtex[:journal]).to eq("Pulmonary Medicine")
      expect(bibtex[:pages]).to eq("1-7")
      expect(bibtex[:year]).to eq("2012")
    end

    it "text" do
      input = "https://doi.org/10.17173/PRETEST8"
      subject = Bolognese::Metadata.new(input: input, from: "datacite")
      expect(subject.valid?).to be true
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("article")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.17173/pretest8")
      expect(bibtex[:doi]).to eq("10.17173/pretest8")
      expect(bibtex[:title]).to eq("PIAAC-Longitudinal (PIAAC-L) 2015")
      expect(bibtex[:pages]).to be_nil
    end

    it "maremma" do
      input = "https://github.com/datacite/maremma"
      subject = Bolognese::Metadata.new(input: input, from: "codemeta")
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("misc")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.5438/qeg0-3gm3")
      expect(bibtex[:doi]).to eq("10.5438/qeg0-3gm3")
      expect(bibtex[:url]).to eq("https://github.com/datacite/maremma")
      expect(bibtex[:title]).to eq("Maremma: a Ruby library for simplified network calls")
      expect(bibtex[:author]).to eq("Fenner, Martin")
      expect(bibtex[:publisher]).to eq("DataCite")
      expect(bibtex[:keywords]).to eq("faraday, excon, net/http")
      expect(bibtex[:year]).to eq("2017")
    end

    it "BlogPosting from string" do
      input = fixture_path + "datacite.json"
      subject = Bolognese::Metadata.new(input: input, from: "datacite_json")
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("article")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.5438/4k3m-nyvg")
      expect(bibtex[:doi]).to eq("10.5438/4k3m-nyvg")
      expect(bibtex[:title]).to eq("Eating your own Dog Food")
      expect(bibtex[:author]).to eq("Fenner, Martin")
      expect(bibtex[:publisher]).to eq("DataCite")
      expect(bibtex[:year]).to eq("2016")
    end

    it "BlogPosting" do
      input = "https://doi.org/10.5438/4K3M-NYVG"
      subject = Bolognese::Metadata.new(input: input, from: "datacite")
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("article")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.5438/4k3m-nyvg")
      expect(bibtex[:doi]).to eq("10.5438/4k3m-nyvg")
      expect(bibtex[:title]).to eq("Eating your own Dog Food")
      expect(bibtex[:author]).to eq("Fenner, Martin")
      expect(bibtex[:publisher]).to eq("DataCite")
      expect(bibtex[:year]).to eq("2016")
    end

    it "Dataset" do
      input = "https://doi.org/10.5061/dryad.8515"
      subject = Bolognese::Metadata.new(input: input, from: "datacite")
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("misc")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.5061/dryad.8515")
      expect(bibtex[:doi]).to eq("10.5061/dryad.8515")
      expect(bibtex[:title]).to eq("Data from: A new malaria agent in African hominids.")
      expect(bibtex[:author]).to eq("Ollomo, Benjamin and Durand, Patrick and Prugnolle, Franck and Douzery, Emmanuel J. P. and Arnathau, Céline and Nkoghe, Dieudonné and Leroy, Eric and Renaud, François")
      expect(bibtex[:publisher]).to eq("Dryad Digital Repository")
      expect(bibtex[:year]).to eq("2011")
    end

    it "from schema_org" do
      input = "https://blog.datacite.org/eating-your-own-dog-food/"
      subject = Bolognese::Metadata.new(input: input, from: "schema_org")
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("article")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.5438/4k3m-nyvg")
      expect(bibtex[:doi]).to eq("10.5438/4k3m-nyvg")
      expect(bibtex[:title]).to eq("Eating your own Dog Food")
      expect(bibtex[:author]).to eq("Fenner, Martin")
      expect(bibtex[:publisher]).to eq("DataCite")
      expect(bibtex[:keywords]).to eq("datacite, doi, metadata, featured")
      expect(bibtex[:year]).to eq("2016")
    end

    it "authors with affiliations" do
      input = "10.16910/jemr.9.1.2"
      subject = Bolognese::Metadata.new(input: input, from: "datacite")
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("misc")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.16910/jemr.9.1.2")
      expect(bibtex[:doi]).to eq("10.16910/jemr.9.1.2")
      expect(bibtex[:title]).to eq("Eye tracking scanpath analysis techniques on web pages: A survey, evaluation and comparison")
      expect(bibtex[:author]).to eq("{Eraslan, Sukru; University Of Manchester, UK, & Middle East Technical University, Northern Cyprus Campus,  Kalkanli, Guzelyurt, Turkey} and {Yesilada, Yeliz; Middle East Technical University, Northern Cyprus Campus, 99738 Kalkanli, Guzelyurt, Mersin 10, Turkey} and {Harper, Simon; School Of Computer Science, University Of Manchester, Manchester, United Kingdom}")
      expect(bibtex[:publisher]).to eq("eyemovement.org")
      expect(bibtex[:keywords]).to eq("eye tracking; eye movements; scanpaths; eye movement sequence; web pages; visual elements; web pages; scanpath analysis techniques; scanpath analysis; pattern detection; common scanpaths")
      expect(bibtex[:year]).to eq("2015")
    end

    it "keywords subject scheme" do
      input = "https://doi.org/10.1594/pangaea.721193"
      subject = Bolognese::Metadata.new(input: input, from: "datacite")
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("misc")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.1594/pangaea.721193")
      expect(bibtex[:doi]).to eq("10.1594/pangaea.721193")
      expect(bibtex[:keywords]).to eq("GetInfo, Animalia, Bottles or small containers/Aquaria ( 20 L), Calcification/Dissolution, Coast and continental shelf, Development, Growth/Morphology, Laboratory experiment, Mollusca, Pelagos, Single species, Temperate, Zooplankton, Experimental treatment, Carbonate system computation flag, Temperature, water, Salinity, pH, Alkalinity, total, Carbon, inorganic, dissolved, Carbon dioxide, Bicarbonate ion, Carbonate ion, Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), Fugacity of carbon dioxide (water) at sea surface temperature (wet air), Aragonite saturation state, Calcite saturation state, Proportion, Crassostrea gigas, larvae length, Crassostrea gigas, larvae height, Crassostrea gigas, non mineralized, Crassostrea gigas, partially mineralized, Crassostrea gigas, fully mineralized, Calculated using seacarb after Nisumaa et al. (2010), Refractometer (Atago 100-S), pH meter (Mettler Toledo), pH meter (PHM290, Radiometer), Measured, European Project on Ocean Acidification (EPOCA), European network of excellence for Ocean Ecosystems Analysis (EUR-OCEANS), Ocean Acidification International Coordination Centre (OA-ICC)")
      expect(bibtex[:year]).to eq("2007")
    end

    it "author is organization" do
      input = fixture_path + 'gtex.xml'
      subject = Bolognese::Metadata.new(input: input, from: "datacite")
      bibtex = BibTeX.parse(subject.bibtex).to_a(quotes: '').first
      expect(bibtex[:bibtex_type].to_s).to eq("misc")
      expect(bibtex[:bibtex_key]).to eq("https://doi.org/10.25491/9hx8-ke93")
      expect(bibtex[:author]).to eq("{The GTEx Consortium}")
    end
  end
end