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Contents
#
# test/unit/bio/util/restriction_enzyme/double_stranded/test_cut_locations.rb - Unit test for Bio::RestrictionEnzyme::DoubleStranded::CutLocations
#
# Author:: Trevor Wennblom <mailto:trevor@corevx.com>
# Copyright:: Copyright (c) 2005-2007 Midwinter Laboratories, LLC (http://midwinterlabs.com)
# License:: The Ruby License
#
# $Id:$
#
# loading helper routine for testing bioruby
require 'pathname'
load Pathname.new(File.join(File.dirname(__FILE__), ['..'] * 5,
'bioruby_test_helper.rb')).cleanpath.to_s
# libraries needed for the tests
require 'test/unit'
require 'bio/util/restriction_enzyme/double_stranded/cut_locations'
module Bio; module TestRestrictionEnzyme #:nodoc:
class TestDoubleStrandedCutLocations < Test::Unit::TestCase #:nodoc:
def setup
@t = Bio::RestrictionEnzyme::DoubleStranded::CutLocationPair
@tt = Bio::RestrictionEnzyme::DoubleStranded::CutLocations
@obj_1 = @t.new([3,5])
@obj_2 = @t.new(3, 5)
@obj_3 = @t.new((3..5))
@obj_4 = @t.new(3..5)
@obj_5 = @t.new(3)
@obj_6 = @t.new(nil,3)
@obj_7 = @t.new(3,nil)
@locations = @tt.new(@obj_1, @obj_2, @obj_3, @obj_4, @obj_5, @obj_6, @obj_7)
end
def test_contents
assert_equal([3,5], @locations[0])
assert_equal([3,nil], @locations[-1])
end
def test_primary
assert_equal([3, 3, 3, 3, 3, nil, 3], @locations.primary)
end
def test_complement
assert_equal([5, 5, 5, 5, nil, 3, nil], @locations.complement)
end
end
end; end
Version data entries
15 entries across 15 versions & 1 rubygems