Sha256: afbf9a95fe89315d602362193b279016b281ed05fc364fbba75b8a53ce042d2a
Contents?: true
Size: 408 Bytes
Versions: 7
Compression:
Stored size: 408 Bytes
Contents
#! /usr/bin/ruby rootpath = File.dirname(File.dirname(__FILE__)) $: << File.join(rootpath,'lib') require 'bio-blastxmlparser' fn = 'test/data/nt_example_blastn.m7' n = Bio::BlastXMLParser::XmlIterator.new(fn).to_enum n.each do | iter | puts "Hits for " + iter.query_id iter.each do | hit | hit.each do | hsp | print hit.hit_id, "\t", hsp.evalue, "\n" if hsp.evalue < 0.001 end end end
Version data entries
7 entries across 7 versions & 1 rubygems