seq1 = sample10-1.fst, 94 bp seq2 = sample10-2.fst (genome1), 599 bp >mrna1 >genome1 1-40 (145-184) 100% <- 41-94 (404-457) 94% 0 . : . : . : . : . : 1 TTGTTTCCGTCGCTGGTTATTGTCTAGAACGCAAAAATAG T ||||||||||||||||||||||||||||||||||||||||<<<...<<<| 145 TTGTTTCCGTCGCTGGTTATTGTCTAGAACGCAAAAATAGCTG...TACT 50 . : . : . : . : . : 42 CTACACATCACTAGCGTGGGTGGGCGGAAAGAGCAGCTCGCCACT CAAG ||||||||||||||| |||||||||||||-|||||||||||||||-|||| 405 CTACACATCACTAGCCTGGGTGGGCGGAA GAGCAGCTCGCCACTTCAAG 100 91 CTAA |||| 454 CTAA