require 'rbbt/workflow/definition' require 'rbbt/workflow/task' require 'rbbt/workflow/step' require 'rbbt/workflow/accessor' require 'rbbt/workflow/doc' require 'rbbt/workflow/examples' module Workflow class TaskNotFoundException < Exception def initialize(workflow, task = nil) if task super "Task '#{ task }' not found in #{ workflow } workflow" else super workflow end end end #{{{ WORKFLOW MANAGEMENT class << self attr_accessor :workflows, :autoinstall, :workflow_dir end self.workflows = [] def self.autoinstall @autoload ||= ENV["RBBT_WORKFLOW_AUTOINSTALL"] == "true" end def self.extended(base) self.workflows << base base.libdir = Path.setup(Path.caller_lib_dir).tap{|p| p.resource = base} end def self.require_remote_workflow(wf_name, url) require 'rbbt/rest/client' eval "Object::#{wf_name} = WorkflowRESTClient.new '#{ url }', '#{wf_name}'" end def self.load_workflow_file(filename) begin $LOAD_PATH.unshift(File.join(File.dirname(File.expand_path(filename)), 'lib')) filename = File.expand_path(filename) require filename Log.debug{"Workflow loaded from: #{ filename }"} return true rescue Exception Log.warn{"Error loading workflow: #{ filename }"} raise $! end end def self.installed_workflows self.workflow_dir.glob('**/workflow.rb').collect do |file| File.basename(File.dirname(file)) end end def self.workflow_dir @workflow_dir ||= begin case when (defined?(Rbbt) and Rbbt.etc.workflow_dir.exists?) dir = Rbbt.etc.workflow_dir.read.strip Path.setup(dir) when defined?(Rbbt) Rbbt.workflows else dir = File.join(ENV['HOME'], '.workflows') Path.setup(dir) end end end def self.require_local_workflow(wf_name) filename = nil if Path === wf_name case # Points to workflow file when ((File.exists?(wf_name.find) and not File.directory?(wf_name.find)) or File.exists?(wf_name.find + '.rb')) filename = wf_name.find # Points to workflow dir when (File.exists?(wf_name.find) and File.directory?(wf_name.find) and File.exists?(File.join(wf_name.find, 'workflow.rb'))) filename = wf_name['workflow.rb'].find end else if ((File.exists?(wf_name) and not File.directory?(wf_name)) or File.exists?(wf_name + '.rb')) filename = (wf_name =~ /\.?\//) ? wf_name : "./" << wf_name else filename = workflow_dir[wf_name]['workflow.rb'].find end end if filename and File.exists? filename load_workflow_file filename else return false end end def self.require_workflow(wf_name) # Already loaded begin workflow = Misc.string2const wf_name Log.debug{"Workflow #{ wf_name } already loaded"} return workflow rescue Exception end # Load remotely if Rbbt.etc.remote_workflows.exists? remote_workflows = Rbbt.etc.remote_workflows.yaml if Hash === remote_workflows and remote_workflows.include?(wf_name) url = remote_workflows[wf_name] begin return require_remote_workflow(wf_name, url) ensure Log.debug{"Workflow #{ wf_name } loaded remotely: #{ url }"} end end end if Open.remote? wf_name url = wf_name wf_name = File.basename(url) begin return require_remote_workflow(wf_name, url) ensure Log.debug{"Workflow #{ wf_name } loaded remotely: #{ url }"} end end # Load locally if wf_name =~ /::\w+$/ clean_name = wf_name.sub(/::.*/,'') Log.info{"Looking for '#{wf_name}' in '#{clean_name}'"} require_workflow clean_name return Misc.string2const Misc.camel_case(wf_name) end Log.info{"Loading workflow #{wf_name}"} require_local_workflow(wf_name) or require_local_workflow(Misc.snake_case(wf_name)) or (Workflow.autoinstall and `rbbt workflow install #{Misc.snake_case(wf_name)}` and require_local_workflow(Misc.snake_case(wf_name))) or raise("Workflow not found or could not be loaded: #{ wf_name }") begin Misc.string2const Misc.camel_case(wf_name) rescue Workflow.workflows.last || true end end attr_accessor :description attr_accessor :libdir, :workdir attr_accessor :helpers, :tasks attr_accessor :task_dependencies, :task_description, :last_task attr_accessor :asynchronous_exports, :synchronous_exports, :exec_exports attr_accessor :step_cache #{{{ ATTR DEFAULTS def workdir=(path) path = Path.setup path.dup unless Path === path @workdir = path end def workdir @workdir ||= if defined? Rbbt text = Module === self ? self.to_s : "Misc" Rbbt.var.jobs[text].find else Path.setup('var/jobs') end end def libdir @libdir = Path.caller_lib_dir if @libdir.nil? @libdir end def step_cache @step_cache ||= {} end def helpers @helpers ||= {} end def tasks @tasks ||= {} end def task_dependencies @task_dependencies ||= {} end def task_description @task_description ||= {} end def asynchronous_exports @asynchronous_exports ||= [] end def synchronous_exports @synchronous_exports ||= [] end def exec_exports @exec_exports ||= [] end # {{{ JOB MANAGEMENT DEFAULT_NAME="Default" def self.resolve_locals(inputs) inputs.each do |name, value| if value =~ /^local:(.*?):(.*)/ or (Array === value and value.length == 1 and value.first =~ /^local:(.*?):(.*)/) or (TSV === value and value.size == 1 and value.keys.first =~ /^local:(.*?):(.*)/) task_name = $1 jobname = $2 value = load_id(File.join(task_name, jobname)).load inputs[name] = value end end end def get_job_step(step_path, task = nil, input_values = nil, dependencies = nil) step_path = step_path.call if Proc === step_path persist = input_values.nil? ? false : true key = Path === step_path ? step_path.find : step_path step = Persist.memory("Step", :key => key, :repo => step_cache, :persist => persist ) do step = Step.new step_path, task, input_values, dependencies helpers.each do |name, block| (class << step; self; end).instance_eval do define_method name, &block end end step end step.task ||= task step.inputs ||= input_values step.dependencies = dependencies if dependencies and (step.dependencies.nil? or step.dependencies.length < dependencies.length) step end def job(taskname, jobname = nil, inputs = {}) taskname = taskname.to_sym jobname = DEFAULT_NAME if jobname.nil? or jobname.empty? task = tasks[taskname] raise "Task not found: #{ taskname }" if task.nil? IndiferentHash.setup(inputs) Workflow.resolve_locals(inputs) dependencies = real_dependencies(task, jobname, inputs, task_dependencies[taskname] || []) if inputs.empty? step_path = step_path taskname, jobname, [], [], task.extension input_values = task.take_input_values(inputs) else input_values = task.take_input_values(inputs) step_path = step_path taskname, jobname, input_values, dependencies, task.extension end get_job_step step_path, task, input_values, dependencies end def load_step(path) task = task_for path get_job_step path, tasks[task.to_sym] end def load_id(id) path = File.join(workdir, id) task = task_for path step = Step.new path, tasks[task.to_sym] step.info if step.info.include? :dependencies step.dependencies = step.info[:dependencies].collect do |task, job| load_id(File.join(task.to_s, job)) end end step end def load_name(task, name) task = tasks[task.to_sym] if String === task or Symbol === task path = step_path task.name, name, [], [], task.extension get_job_step path, task end def jobs(taskname, query = nil) task_dir = File.join(File.expand_path(workdir.find), taskname.to_s) pattern = File.join(File.expand_path(task_dir), '**/*') job_info_files = Dir.glob(Step.info_file(pattern)).collect{|f| Misc.path_relative_to task_dir, f } job_info_files = job_info_files.select{|f| f.index(query) == 0 } if query job_info_files.collect{|f| job_name = Step.job_name_for_info_file(f, tasks[taskname].extension) } end #{{{ Make workflow resources local def local_persist_setup class << self include LocalPersist end self.local_persist_dir = Rbbt.var.cache.persistence.find :lib end def local_workdir_setup self.workdir = Rbbt.var.jobs.find :lib end def make_local local_persist_setup local_workdir_setup end def with_workdir(workdir) saved = self.workdir begin self.workdir = Path.setup(File.expand_path(workdir)) yield ensure self.workdir = saved end end end