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Contents
using Base.Test
include("hamming.jl")
@testset "identical strands" begin
@test distance("A", "A") == 0
@test distance("GGACTGA", "GGACTGA") == 0
end
@testset "complete distance" begin
@test distance("A", "G") == 1
@test distance("AG", "CT") == 2
end
@testset "small distance" begin
@test distance("AT", "CT") == 1
@test distance("GGACG", "GGTCG") == 1
@test distance("ACCAGGG", "ACTATGG") == 2
end
@testset "non-unique characters" begin
@test distance("AGA", "AGG") == 1
@test distance("AGG", "AGA") == 1
end
@testset "same nucleotides in different positions" begin
@test distance("TAG", "GAT") == 2
end
@testset "large distance" begin
@test distance("GATACA", "GCATAA") == 4
@test distance("GGACGGATTCTG", "AGGACGGATTCT") == 9
end
@testset "empty strands" begin
@test distance("", "") == 0
end
@testset "different strand lengths" begin
@test_throws ArgumentError distance("AATG", "AAA")
@test_throws ArgumentError distance("ATA", "AGTG")
end
Version data entries
318 entries across 318 versions & 1 rubygems