Contents

<div style="width: 90%; background-color:#ecf0f1; margin: 0 auto;"> 
	<h1 style="text-align: center; background-color:#d6eaf8">Profile <%= @hash_vars[:profile_id] %></h1>
	<h1 style="text-align: center; background-color:#d6eaf8">Evidence similar to profile</h1>
	<% @hash_vars[:similarity_matrixs].each do |pair, similarity_matrix| %>
		<% 
			matrix_name = pair + '_sim_matrix'
			if pair.include?('gene_HP')
				dict = @hash_vars[:evidences][pair][:id2lab]
				header = similarity_matrix.first
				header.map! do |item|
					label = dict[item.to_s]
					label.nil? ? item : label
				end
				@hash_vars[:candidates].map! do |id, score|
					label = dict[id]
					[label.nil? ? id : label, score]
				end
				@hash_vars[:genomic_coordinates].transform_keys! do |k, v|
					label = dict[k]
					label.nil? ? k : label
				end
			end
			@hash_vars[matrix_name] = similarity_matrix
		%>
		<%=heatmap(id: matrix_name, header: true, row_names: true, title: pair )%>

	<% end %>
	<%=circular_genome(id: :candidates, header: false, row_names: true, transpose: false, 
		 genomic_coordinates: @hash_vars[:genomic_coordinates] )%>
	<% if !@hash_vars[:var_ids].nil? 
		if @hash_vars[:var_ids].length > 200 %>
			<p> Too much variant records</p>
		<% else %>
			<%=circular_genome(id: :var_ids, header: false, 
				row_names: true, transpose: false, 
		 		genomic_coordinates: @hash_vars[:var_coordinates] )%>
		<% end %>
	<% end %>

	<h1 style="text-align: center; background-color:#d6eaf8">Candidate regions</h1>

	<%=  table(id: :hotspot_table) do |data|
			data.each do |row|
				row[1] = row[1].join(" ")
				row[2] = row[2].join(",")
				row[3] = row[3].join(",")
			end
		end
	%>
</div>

Version data entries

1 entries across 1 versions & 1 rubygems

Version	Path
pets-0.2.5	templates/evidence_profile.erb