Sha256: 90a45997de4be4d6025480cd8f934b4fa8187ad0af3140fdda5c0550c5c5a09b
Contents?: true
Size: 538 Bytes
Versions: 9
Compression:
Stored size: 538 Bytes
Contents
When /^slice the resulting blocks according to the given interval$/ do
# @blocks and @interval
@blocks = @blocks.collect { |b| b.slice(@interval) }
end
When /^I extract a slice over the genomic interval$/ do |table|
# table is a Cucumber::Ast::Table
intervals = table.hashes.collect do |row|
Bio::GenomicInterval.zero_based(row['chrom'],
row['start'].to_i,
row['end'].to_i)
end
intervals.size.should == 1
@blocks = @access.slice(intervals[0])
end
Version data entries
9 entries across 9 versions & 1 rubygems