module HealthDataStandards module SVS class ValueSet include Mongoid::Document field :oid, type: String field :display_name, type: String field :version, type: String field :user_id, type: String # Eventually we need to delete this from bundles when exporting field :categories, type: Hash belongs_to :bundle, class_name: "HealthDataStandards::CQM::Bundle", inverse_of: :value_sets index({oid: 1}) index({display_name: 1}) embeds_many :concepts index "concepts.code" => 1 index "concepts.code_system" => 1 index "concepts.code_system_name" => 1 index "concepts.display_name" => 1 index "bundle_id" => 1 scope :by_oid, ->(oid){where(:oid => oid)} # Provides an Array of Hashes. Each code system gets its own Hash # The hash has a key of "set" for the code system name and "values" # for the actual code list def code_set_map codes = [] self.concepts.inject({}) do |memo, concept| memo[concept.code_system_name] ||= [] memo[concept.code_system_name] << concept.code memo end.each_pair do |code_set, code_list| codes << {"set" => code_set, "values" => code_list} end codes end def self.load_from_xml(doc) doc.root.add_namespace_definition("vs","urn:ihe:iti:svs:2008") vs_element = doc.at_xpath("/vs:RetrieveValueSetResponse/vs:ValueSet|/vs:RetrieveMultipleValueSetsResponse/vs:DescribedValueSet") if vs_element vs = ValueSet.new(oid: vs_element["ID"], display_name: vs_element["displayName"], version: vs_element["version"]) vs.concepts = extract_concepts(vs_element) vs.categories = extract_categories(vs_element) return vs end end def self.extract_concepts(vs_element) concepts = vs_element.xpath("//vs:Concept").collect do |con| code_system_name = HealthDataStandards::Util::CodeSystemHelper::CODE_SYSTEMS[con["codeSystem"]] || con["codeSystemName"] Concept.new(code: con["code"], code_system_name: code_system_name, code_system_version: con["codeSystemVersion"], display_name: con["displayName"], code_system: con["codeSystem"]) end end def self.extract_categories(vs_element) category_hash = Hash.new {|h,k| h[k]=[]} groups_with_categories = vs_element.xpath("//vs:Group/@ID[../@displayName='CATEGORY']") groups_with_categories.each do |group_number| measure = vs_element.xpath("//vs:Group[@displayName='CMS eMeasure ID' and @ID='#{group_number}']/vs:Keyword").text categories_for_group = vs_element.xpath("//vs:Group[@displayName='CATEGORY' and @ID='#{group_number}']/vs:Keyword") categories_for_group.each do |category| category_hash[measure] << category.text end end category_hash.size > 0 ? category_hash : nil end end end end