Sha256: 7aa30c87df971c9f556412eeaf350a2a0529c53a8aa93f50a7bf834500483526
Contents?: true
Size: 1.47 KB
Versions: 96
Compression:
Stored size: 1.47 KB
Contents
import static org.hamcrest.CoreMatchers.*;
import static org.junit.Assert.*;
import org.junit.Test;
import org.junit.Ignore;
public class HammingTest {
@Test
public void testNoDifferenceBetweenIdenticalStrands() {
assertThat(Hamming.compute("A", "A"), is(0));
}
@Ignore
@Test
public void testCompleteHammingDistanceOfForSingleNucleotideStrand() {
assertThat(Hamming.compute("A", "G"), is(1));
}
@Ignore
@Test
public void testCompleteHammingDistanceForSmallStrand() {
assertThat(Hamming.compute("AG", "CT"), is(2));
}
@Ignore
@Test
public void testSmallHammingDistance() {
assertThat(Hamming.compute("AT", "CT"), is(1));
}
@Ignore
@Test
public void testSmallHammingDistanceInLongerStrand() {
assertThat(Hamming.compute("GGACG", "GGTCG"), is(1));
}
@Ignore
@Test(expected = IllegalArgumentException.class)
public void testValidatesFirstStrandNotLonger() {
Hamming.compute("AAAG", "AAA");
}
@Ignore
@Test(expected = IllegalArgumentException.class)
public void testValidatesOtherStrandNotLonger() {
Hamming.compute("AAA", "AAAG");
}
@Ignore
@Test
public void testLargeHammingDistance() {
assertThat(Hamming.compute("GATACA", "GCATAA"), is(4));
}
@Ignore
@Test
public void testHammingDistanceInVeryLongStrand() {
assertThat(Hamming.compute("GGACGGATTCTG", "AGGACGGATTCT"), is(9));
}
}
Version data entries
96 entries across 96 versions & 1 rubygems