Sha256: 69c4b1d88118f31baff9c03709b43d907e7ca2694029ac2aa083a311366ec7fa
Contents?: true
Size: 473 Bytes
Versions: 12
Compression:
Stored size: 473 Bytes
Contents
##
# SORT JOINED READS BY LENGTH
#
module Lederhosen
class CLI
desc "sort",
"sort reads by length in descending order (pre-requisite for UCLUST)"
method_option :input, :type => :string, :required => true
method_option :output, :type => :string, :required => true
def sort
input = options[:input]
output = options[:output]
@shell.mute {
run "uclust --mergesort #{input} --output #{output}"
}
end
end
end
Version data entries
12 entries across 12 versions & 1 rubygems