Sha256: 638851c3649a1dbeaf14ac17c758d3ba88180627ad1b80b42cc5a487801ad241
Contents?: true
Size: 1.61 KB
Versions: 19
Compression:
Stored size: 1.61 KB
Contents
require File.join(File.expand_path(File.dirname(__FILE__)), '../..', 'test_helper.rb')
require 'rbbt/ner/brat'
class TestBrat < Test::Unit::TestCase
def test_load
text =<<-EOF
T2 DBTF 52 55 Nrl
#2 AnnotatorNotes T2 4901
T3 NONDBTF 80 89 rhodopsin
#3 AnnotatorNotes T3 6010
T4 BIOLOGICALPROCESS 90 105 gene expression
#4 AnnotatorNotes T4 -
T5 DBTF 127 130 Nrl
#5 AnnotatorNotes T5 4901
T7 MOLECULARFUNCTION 197 204 binding
#7 AnnotatorNotes T7 -
T8 PHENOTYPE 241 252 extended AP
#8 AnnotatorNotes T8 -
T10 DBTF 331 334 Nrl
#10 AnnotatorNotes T10 4901
T11 TISSUE 381 399 photoreceptor cell
#11 AnnotatorNotes T11 -
T12 NONDBTF 414 423 rhodopsin
#12 AnnotatorNotes T12 6010
T13 CELLULARCOMPONENT 494 501 nuclear
#13 AnnotatorNotes T13 -
T14 TISSUE 548 572 retinoblastoma cell line
#14 AnnotatorNotes T14 -
T17 NONDBTF 660 669 rhodopsin
#17 AnnotatorNotes T17 6010
T18 DBTF 676 679 Nrl
#18 AnnotatorNotes T18 4901
T19 CELLULARCOMPONENT 749 764 protein complex
#19 AnnotatorNotes T19 -
T20 DBTF 797 800 Nrl
#20 AnnotatorNotes T20 4901
T21 DBTF 853 856 Nrl
#21 AnnotatorNotes T21 4901
T22 MOLECULARFUNCTION 882 892 luciferase
#22 AnnotatorNotes T22 -
T23 DBTF 943 946 Nrl
#23 AnnotatorNotes T23 4901
T24 NONDBTF 989 998 rhodopsin
#24 AnnotatorNotes T24 6010
T26 DBTF 1110 1113 Nrl
#26 AnnotatorNotes T26 4901
T27 DBTF 1224 1227 Nrl
#27 AnnotatorNotes T27 4901
T28 DBTF 1271 1274 Nrl
#28 AnnotatorNotes T28 4901
T30 DBTF 1385 1388 Nrl
#30 AnnotatorNotes T30 4901
R1 ACTIVATION Arg1:T2 Arg2:T3
R2 ACTIVATION Arg1:T10 Arg2:T12
R3 ACTIVATION Arg1:T23 Arg2:T24
T1 DBTF 250 254 AP-1
EOF
io = StringIO.new text
iii Brat.load io
end
end
Version data entries
19 entries across 19 versions & 1 rubygems