--- !ruby/object:Gem::Specification
name: genevalidatorapp
version: !ruby/object:Gem::Version
  version: 1.5.4
platform: ruby
authors:
- Monica Dragan
- Ismail Moghul
- Anurag Priyam
- Yannick Wurm
autorequire: 
bindir: bin
cert_chain: []
date: 2016-09-13 00:00:00.000000000 Z
dependencies:
- !ruby/object:Gem::Dependency
  name: bundler
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.6'
  type: :development
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.6'
- !ruby/object:Gem::Dependency
  name: rake
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '10.3'
  type: :development
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '10.3'
- !ruby/object:Gem::Dependency
  name: rspec
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '2.8'
    - - ">="
      - !ruby/object:Gem::Version
        version: 2.8.0
  type: :development
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '2.8'
    - - ">="
      - !ruby/object:Gem::Version
        version: 2.8.0
- !ruby/object:Gem::Dependency
  name: rack-test
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '0.6'
  type: :development
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '0.6'
- !ruby/object:Gem::Dependency
  name: capybara
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '2.4'
    - - ">="
      - !ruby/object:Gem::Version
        version: 2.4.4
  type: :development
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '2.4'
    - - ">="
      - !ruby/object:Gem::Version
        version: 2.4.4
- !ruby/object:Gem::Dependency
  name: w3c_validators
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.1'
  type: :development
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.1'
- !ruby/object:Gem::Dependency
  name: genevalidator
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.6'
  type: :runtime
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.6'
- !ruby/object:Gem::Dependency
  name: bio
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.4'
  type: :runtime
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.4'
- !ruby/object:Gem::Dependency
  name: sinatra
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.4'
  type: :runtime
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.4'
- !ruby/object:Gem::Dependency
  name: sinatra-cross_origin
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '0.3'
  type: :runtime
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '0.3'
- !ruby/object:Gem::Dependency
  name: slim
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '3.0'
  type: :runtime
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '3.0'
- !ruby/object:Gem::Dependency
  name: slop
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '3.6'
  type: :runtime
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '3.6'
description: A Web App wrapper for GeneValidator, a program for validating gene predictions.
email: y.wurm@qmul.ac.uk
executables:
- genevalidatorapp
extensions: []
extra_rdoc_files: []
files:
- ".gitignore"
- ".travis.yml"
- Gemfile
- LICENSE.txt
- README.md
- Rakefile
- bin/genevalidatorapp
- config.ru
- docker/Dockerfile
- genevalidatorapp.gemspec
- lib/genevalidatorapp.rb
- lib/genevalidatorapp/config.rb
- lib/genevalidatorapp/database.rb
- lib/genevalidatorapp/exceptions.rb
- lib/genevalidatorapp/genevalidator.rb
- lib/genevalidatorapp/logger.rb
- lib/genevalidatorapp/routes.rb
- lib/genevalidatorapp/server.rb
- lib/genevalidatorapp/version.rb
- public/GeneValidator/loading.html
- public/src/css/bootstrap1.min.css
- public/src/css/custom.css
- public/src/css/custom.min.css
- public/src/css/font-awesome.min.css
- public/src/js/bionode-seq.min.js
- public/src/js/bootstrap.min.js
- public/src/js/d3.v3.min.js
- public/src/js/genevalidator.js
- public/src/js/jquery.cookie.min.js
- public/src/js/jquery.min.js
- public/src/js/jquery.tablesorter.min.js
- public/src/js/jquery.validate.min.js
- public/src/js/plots.js
- public/web_files/css/GV_compiled_css.min.css
- public/web_files/fonts/FontAwesome.otf
- public/web_files/fonts/fontawesome-webfont.eot
- public/web_files/fonts/fontawesome-webfont.svg
- public/web_files/fonts/fontawesome-webfont.ttf
- public/web_files/fonts/fontawesome-webfont.woff
- public/web_files/img/gene.png
- public/web_files/js/GV_compiled_js.min.js
- public/web_files/json/.gitkeep
- spec/database/funky_ids/funky_ids.fa
- spec/database/funky_ids/funky_ids.fa.nhr
- spec/database/funky_ids/funky_ids.fa.nin
- spec/database/funky_ids/funky_ids.fa.nog
- spec/database/funky_ids/funky_ids.fa.nsd
- spec/database/funky_ids/funky_ids.fa.nsi
- spec/database/funky_ids/funky_ids.fa.nsq
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.phr
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.pin
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.pog
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.psd
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.psi
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.psq
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nhr
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nin
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nog
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nsd
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nsi
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nsq
- spec/database/unformatted/Cardiocondyla_obscurior/Cobs1.4.proteins.fa
- spec/database/without_parse_seqids/without_parse_seqids.fa
- spec/database/without_parse_seqids/without_parse_seqids.fa.phr
- spec/database/without_parse_seqids/without_parse_seqids.fa.pin
- spec/database/without_parse_seqids/without_parse_seqids.fa.psq
- spec/empty_config.yml
- spec/route_spec.rb
- views/500.slim
- views/index.slim
- views/layout.slim
- views/results.slim
homepage: https://wurmlab.github.io/tools/genevalidator/
licenses:
- AGPL
metadata: {}
post_install_message: |2+

  ------------------------------------------------------------------------
    Thank you for validating your gene predictions with GeneValidator!

    To launch GeneValidatorApp execute 'genevalidatorapp' from command line.

      $ genevalidatorapp [options]

    Visit https://github.com/wurmlab/genevalidatorapp for more information.
  ------------------------------------------------------------------------

rdoc_options: []
require_paths:
- lib
required_ruby_version: !ruby/object:Gem::Requirement
  requirements:
  - - ">="
    - !ruby/object:Gem::Version
      version: 2.0.0
required_rubygems_version: !ruby/object:Gem::Requirement
  requirements:
  - - ">="
    - !ruby/object:Gem::Version
      version: '0'
requirements: []
rubyforge_project: 
rubygems_version: 2.4.8
signing_key: 
specification_version: 4
summary: A Web App wrapper for GeneValidator.
test_files:
- spec/database/funky_ids/funky_ids.fa
- spec/database/funky_ids/funky_ids.fa.nhr
- spec/database/funky_ids/funky_ids.fa.nin
- spec/database/funky_ids/funky_ids.fa.nog
- spec/database/funky_ids/funky_ids.fa.nsd
- spec/database/funky_ids/funky_ids.fa.nsi
- spec/database/funky_ids/funky_ids.fa.nsq
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.phr
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.pin
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.pog
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.psd
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.psi
- spec/database/sample/proteins/Solenopsis_invicta/Sinvicta2-2-3.prot.subset.fasta.psq
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nhr
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nin
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nog
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nsd
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nsi
- spec/database/sample/transcripts/Solenopsis_invicta/Sinvicta2-2-3.cdna.subset.fasta.nsq
- spec/database/unformatted/Cardiocondyla_obscurior/Cobs1.4.proteins.fa
- spec/database/without_parse_seqids/without_parse_seqids.fa
- spec/database/without_parse_seqids/without_parse_seqids.fa.phr
- spec/database/without_parse_seqids/without_parse_seqids.fa.pin
- spec/database/without_parse_seqids/without_parse_seqids.fa.psq
- spec/empty_config.yml
- spec/route_spec.rb
has_rdoc: