--- !ruby/object:Gem::Specification
name: npsearch
version: !ruby/object:Gem::Version
  version: 2.1.1
platform: ruby
authors:
- Ismail Moghul
- Matthew Rowe
- Anurag Priyam
- Maurice Elphick
- Yannick Wurm
autorequire: 
bindir: bin
cert_chain: []
date: 2016-11-11 00:00:00.000000000 Z
dependencies:
- !ruby/object:Gem::Dependency
  name: bundler
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.6'
  type: :development
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.6'
- !ruby/object:Gem::Dependency
  name: rake
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '10.3'
  type: :development
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '10.3'
- !ruby/object:Gem::Dependency
  name: coveralls
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - ">="
      - !ruby/object:Gem::Version
        version: '0'
  type: :development
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - ">="
      - !ruby/object:Gem::Version
        version: '0'
- !ruby/object:Gem::Dependency
  name: minitest
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '5.4'
  type: :development
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '5.4'
- !ruby/object:Gem::Dependency
  name: bio
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.4'
  type: :runtime
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '1.4'
- !ruby/object:Gem::Dependency
  name: slim
  requirement: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '3.0'
  type: :runtime
  prerelease: false
  version_requirements: !ruby/object:Gem::Requirement
    requirements:
    - - "~>"
      - !ruby/object:Gem::Version
        version: '3.0'
description: |-
  Search for Neuropeptides based solely on the common neuropeptide markers (e.g. signal peptide, dibasic cleavage sites etc.) i.e. not based on homology to known neuropeptides.

   For more information: https://github.com/wurmlab/npsearch
email:
- y.wurm@qmul.ac.uk
executables:
- npsearch
extensions: []
extra_rdoc_files: []
files:
- ".coveralls.yml"
- ".gitignore"
- ".travis.yml"
- Gemfile
- LICENSE.txt
- README.md
- Rakefile
- bin/npsearch
- exemplar_data/README.md
- exemplar_data/genetic_data.fa
- lib/npsearch.rb
- lib/npsearch/arg_validator.rb
- lib/npsearch/output.rb
- lib/npsearch/pool.rb
- lib/npsearch/scoresequence.rb
- lib/npsearch/sequence.rb
- lib/npsearch/signalp.rb
- lib/npsearch/version.rb
- npsearch.gemspec
- templates/contents.slim
- test/files/empty_file.fa
- test/files/genetic.fa
- test/files/mixed_content.fa
- test/files/not_fasta.fa
- test/files/protein.fa
- test/files/signalp/signalp
- test/test_argument_validator.rb
- test/test_helper.rb
- test/test_sequence.rb
- test/test_sequence_scoring.rb
homepage: https://github.com/wurmlab/npsearch
licenses:
- AGPL
metadata: {}
post_install_message: 
rdoc_options: []
require_paths:
- lib
required_ruby_version: !ruby/object:Gem::Requirement
  requirements:
  - - ">="
    - !ruby/object:Gem::Version
      version: 2.0.0
required_rubygems_version: !ruby/object:Gem::Requirement
  requirements:
  - - ">="
    - !ruby/object:Gem::Version
      version: '0'
requirements: []
rubyforge_project: 
rubygems_version: 2.4.8
signing_key: 
specification_version: 4
summary: Search for neuropeptides based on the common neuropeptides markers
test_files:
- test/files/empty_file.fa
- test/files/genetic.fa
- test/files/mixed_content.fa
- test/files/not_fasta.fa
- test/files/protein.fa
- test/files/signalp/signalp
- test/test_argument_validator.rb
- test/test_helper.rb
- test/test_sequence.rb
- test/test_sequence_scoring.rb
has_rdoc: