# frozen_string_literal: true require 'rumale/base/base_estimator' require 'rumale/base/transformer' module Rumale module Decomposition # FastICA is a class that implments Fast Independent Component Analaysis. # # @example # require 'numo/linalg/autoloader' # # transformer = Rumale::Decomposition::FastICA.new(n_components: 2, random_seed: 1) # source_data = transformer.fit_transform(observed_data) # # *Reference* # - A. Hyvarinen "Fast and Robust Fixed-Point Algorithms for Independent Component Analysis," IEEE Trans. Neural Networks, Vol. 10 (3), pp. 626--634, 1999. # - A. Hyvarinen and E. Oja, "Independent Component Analysis: Algorithms and Applications," Neural Networks, Vol. 13 (4-5), pp. 411--430, 2000. class FastICA include Base::BaseEstimator include Base::Transformer # Returns the unmixing matrix. # @return [Numo::DFloat] (shape: [n_components, n_features]) attr_reader :components # Returns the mixing matrix. # @return [Numo::DFloat] (shape: [n_features, n_components]) attr_reader :mixing # Returns the number of iterations when converged. # @return [Integer] attr_reader :n_iter # Return the random generator. # @return [Random] attr_reader :rng # Create a new transformer with FastICA. # # @param n_components [Integer] The number of independent components. # @param whiten [Boolean] The flag indicating whether to perform whitening. # @param fun [String] The type of contrast function ('logcosh', 'exp', or 'cube'). # @param alpha [Float] The parameter of contrast function for 'logcosh' and 'exp'. # If fun = 'cube', this parameter is ignored. # @param max_iter [Integer] The maximum number of iterations. # @param tol [Float] The tolerance of termination criterion. # @param random_seed [Integer] The seed value using to initialize the random generator. def initialize(n_components: 2, whiten: true, fun: 'logcosh', alpha: 1.0, max_iter: 200, tol: 1e-4, random_seed: nil) check_params_numeric(n_components: n_components, max_iter: max_iter, alpha: alpha, tol: tol) check_params_boolean(whiten: whiten) check_params_string(fun: fun) check_params_numeric_or_nil(random_seed: random_seed) check_params_positive(n_components: n_components, max_iter: max_iter, tol: tol) @params = {} @params[:n_components] = n_components @params[:whiten] = whiten @params[:fun] = fun @params[:alpha] = alpha @params[:max_iter] = max_iter @params[:tol] = tol @params[:random_seed] = random_seed @params[:random_seed] ||= srand @components = nil @mixing = nil @n_iter = nil @mean = nil @rng = Random.new(@params[:random_seed]) end # Fit the model with given training data. # # @overload fit(x) -> FastICA # @param x [Numo::DFloat] (shape: [n_samples, n_features]) The training data to be used for fitting the model. # @return [FastICA] The learned transformer itself. def fit(x, _y = nil) x = check_convert_sample_array(x) raise 'FastICA#fit requires Numo::Linalg but that is not loaded.' unless enable_linalg? @mean, whiten_mat = whitening(x, @params[:n_components]) if @params[:whiten] wx = @params[:whiten] ? (x - @mean).dot(whiten_mat.transpose) : x unmixing, @n_iter = ica(wx, @params[:fun], @params[:max_iter], @params[:tol], @rng.dup) @components = @params[:whiten] ? unmixing.dot(whiten_mat) : unmixing @mixing = Numo::Linalg.pinv(@components) if @params[:n_components] == 1 @components = @components.flatten.dup @mixing = @mixing.flatten.dup end self end # Fit the model with training data, and then transform them with the learned model. # # @overload fit_transform(x) -> Numo::DFloat # @param x [Numo::DFloat] (shape: [n_samples, n_features]) The training data to be used for fitting the model. # @return [Numo::DFloat] (shape: [n_samples, n_components]) The transformed data def fit_transform(x, _y = nil) x = check_convert_sample_array(x) raise 'FastICA#fit_transform requires Numo::Linalg but that is not loaded.' unless enable_linalg? fit(x).transform(x) end # Transform the given data with the learned model. # # @param x [Numo::DFloat] (shape: [n_samples, n_features]) The data to be transformed with the learned model. # @return [Numo::DFloat] (shape: [n_samples, n_components]) The transformed data. def transform(x) x = check_convert_sample_array(x) cx = @params[:whiten] ? (x - @mean) : x cx.dot(@components.transpose) end # Inverse transform the given transformed data with the learned model. # # @param z [Numo::DFloat] (shape: [n_samples, n_components]) The source data reconstructed to the mixed data. # @return [Numo::DFloat] (shape: [n_samples, n_featuress]) The mixed data. def inverse_transform(z) z = check_convert_sample_array(z) m = @mixing.shape[1].nil? ? @mixing.expand_dims(0).transpose : @mixing x = z.dot(m.transpose) x += @mean if @params[:whiten] x end private def whitening(x, n_components) n_samples, n_features = x.shape mean_vec = x.mean(0) centered_x = x - mean_vec covar_mat = centered_x.transpose.dot(centered_x) / n_samples eig_vals, eig_vecs = Numo::Linalg.eigh(covar_mat, vals_range: (n_features - n_components)...n_features) [mean_vec, (eig_vecs.reverse(1).dup * (1 / Numo::NMath.sqrt(eig_vals.reverse.dup))).transpose.dup] end def ica(x, fun, max_iter, tol, sub_rng) n_samples, n_components = x.shape w = decorrelation(Rumale::Utils.rand_normal([n_components, n_components], sub_rng)) n_iters = 0 max_iter.times do |t| n_iters = t + 1 gx, ggx = gradient(x.dot(w.transpose), fun) new_w = decorrelation(gx.transpose.dot(x) / n_samples - w * ggx / n_samples) err = (new_w - w).abs.max w = new_w break if err <= tol end [w, n_iters] end def decorrelation(w) eig_vals, eig_vecs = Numo::Linalg.eigh(w.dot(w.transpose)) decorr_mat = (eig_vecs * (1 / Numo::NMath.sqrt(eig_vals))).dot(eig_vecs.transpose) decorr_mat.dot(w) end def gradient(x, func) case func when 'exp' grad_exp(x, @params[:alpha]) when 'cube' grad_cube(x) else grad_logcosh(x, @params[:alpha]) end end def grad_logcosh(x, alpha) gx = Numo::NMath.tanh(alpha * x) ggx = (alpha * (1 - gx**2)).sum(0) [gx, ggx] end def grad_exp(x, alpha) squared_x = x**2 exp_x = Numo::NMath.exp(-0.5 * alpha * squared_x) gx = exp_x * x ggx = (exp_x * (1 - alpha * squared_x)).sum(0) [gx, ggx] end def grad_cube(x) [x**3, (3 * x**2).sum(0)] end end end end