Sha256: 4a22c7c7063b42ca96f2809acae97ace54e65ac5ea93d7160ccff2c3bef7dc73

Contents?: true

Size: 803 Bytes

Versions: 15

Compression:

Stored size: 803 Bytes

Contents

#
# = bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb - Bio::SangerChromatogram to Bio::Sequence adapter module
#
# Copyright::	Copyright (C) 2009 Anthony Underwood <anthony.underwood@hpa.org.uk>, <email2ants@gmail.com>
# License::	The Ruby License
#
# $Id:$
#

require 'bio/sequence'
require 'bio/sequence/adapter'

# Internal use only. Normal users should not use this module.
#
# Bio::SangerChromatogram to Bio::Sequence adapter module.
# It is internally used in Bio::SangerChromatogram#to_biosequence.
#
module Bio::Sequence::Adapter::SangerChromatogram

  extend Bio::Sequence::Adapter

  private

  def_biosequence_adapter :seq

  # primary accession
  def_biosequence_adapter :primary_accession do |orig|
    orig.version
  end

end #module Bio::Sequence::Adapter::SangerChromatogram

Version data entries

15 entries across 15 versions & 1 rubygems

Version Path
bio-2.0.5 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-2.0.4 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-2.0.3 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-2.0.2 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-2.0.1 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-2.0.0 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-1.6.0.pre.20181210 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-1.5.2 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-1.5.1 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-1.5.0 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-1.4.3.0001 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-1.4.3 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-1.4.2 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-1.4.1 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb
bio-1.4.0 lib/bio/db/sanger_chromatogram/chromatogram_to_biosequence.rb