require_relative 'behaviors/dottable' require_relative 'nodes/node' module ConceptQL class GraphNodifier class DotNode < ConceptQL::Nodes::Node include ConceptQL::Behaviors::Dottable TYPES = { # Conditions condition: :condition_occurrence, primary_diagnosis: :condition_occurrence, icd9: :condition_occurrence, icd10: :condition_occurrence, condition_type: :condition_occurrence, # Procedures procedure: :procedure_occurrence, cpt: :procedure_occurrence, drg: :procedure_occurrence, hcpcs: :procedure_occurrence, icd9_procedure: :procedure_occurrence, procedure_cost: :procedure_cost, # Visits visit_occurrence: :visit_occurrence, place_of_service: :visit_occurrence, place_of_service_code: :visit_occurrence, # Person person: :person, gender: :person, race: :person, # Payer payer: :payer_plan_period, # Death death: :death, # Observation loinc: :observation, # Drug drug_exposure: :drug_exposure, rxnorm: :drug_exposure, drug_cost: :drug_cost, drug_type_concept_id: :drug_exposure, drug_type_concept: :drug_exposure, # Date Nodes date_range: :date, # Miscelaneous nodes concept: :misc, vsac: :misc } attr :values, :name def initialize(name, values) @name = name.to_s super(nil, values) end def display_name @__display_name ||= begin output = @name.dup output += ": #{arguments.join(', ')}" unless arguments.empty? if output.length > 100 parts = output.split output = parts.each_slice(output.length / parts.count).map do |subparts| subparts.join(' ') end.join ('\n') end output += "\n#{options.map{|k,v| "#{k}: #{v}"}.join("\n")}" unless options.nil? || options.empty? output end end def types types = [TYPES[name.to_sym] || children.map(&:types)].flatten.uniq types.empty? ? [:misc] : types end end class BinaryOperatorNode < DotNode def display_name output = name output += "\n#{displayable_options.map{|k,v| "#{k}: #{v}"}.join("\n")}" output end def displayable_options options.select{ |k,v| ![:left, :right].include?(k) } || {} end def left options[:left] end def right options[:right] end def graph_it(g, db) left.graph_it(g, db) right.graph_it(g, db) cluster_name = "cluster_#{node_name}" me = g.send(cluster_name) do |sub| sub[rank: 'same', label: display_name, color: 'black'] sub.send("#{cluster_name}_left").send('[]', shape: 'point', color: type_color(types)) sub.send("#{cluster_name}_right").send('[]', shape: 'point') end left.link_to(g, me.send("#{cluster_name}_left")) right.link_to(g, me.send("#{cluster_name}_right")) @__graph_node = me.send("#{cluster_name}_left") end def types left.types end def arguments options.values end end class DefineNode < DotNode def initialize(*args) @gn = args.pop super(*args) end def types @gn.types[namify(arguments.first)] = super end def shape :cds end end class RecallNode < DotNode def initialize(*args) @gn = args.pop super(*args) end def types @gn.types[namify(arguments.first)] end def shape :cds end end class VsacNode < DotNode def initialize(name, values, types) @types = types super(name, values) end def types [ @types ].flatten.compact.map(&:to_sym) end end BINARY_OPERATOR_TYPES = %w(before after meets met_by started_by starts contains during overlaps overlapped_by finished_by finishes coincides except person_filter less_than less_than_or_equal equal not_equal greater_than greater_than_or_equal filter).map { |temp| [temp, "not_#{temp}"] }.flatten.map(&:to_sym) def types @types ||= {} end def create(type, values, tree) if BINARY_OPERATOR_TYPES.include?(type) return BinaryOperatorNode.new(type, values) elsif type == :define return DefineNode.new(type, values, self) elsif type == :recall return RecallNode.new(type, values, self) elsif type == :vsac types = values.pop return VsacNode.new(type, values, types) end DotNode.new(type, values) end end end