Sha256: 45a3eed97f12785c295a8247916ba021b7d4ad92b4b140e4435986c5302a33ef
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Size: 1.33 KB
Versions: 43
Compression:
Stored size: 1.33 KB
Contents
require 'zip'
require_relative 'temp_dir'
module Inferno
module Terminology
module Tasks
class UnzipUMLS
include TempDir
attr_reader :version
def initialize(version:)
@version = version
end
def run
# https://stackoverflow.com/questions/19754883/how-to-unzip-a-zip-file-containing-folders-and-files-in-rails-while-keeping-the
Zip::File.open(umls_zip_path) do |zip_file|
# Handle entries one by one
zip_file.each do |entry|
# Extract to file/directory/symlink
Inferno.logger.info "Extracting #{entry.name}"
f_path = File.join(umls_dir, entry.name)
FileUtils.mkdir_p(File.dirname(f_path))
zip_file.extract(entry, f_path) unless File.exist?(f_path)
end
end
wildcard_path = "#{umls_dir}/20*"
Zip::File.open(File.expand_path("#{Dir[wildcard_path][0]}/mmsys.zip")) do |zip_file|
zip_file.each do |entry|
Inferno.logger.info "Extracting #{entry.name}"
f_path = File.join((Dir[wildcard_path][0]).to_s, entry.name)
FileUtils.mkdir_p(File.dirname(f_path))
zip_file.extract(entry, f_path) unless File.exist?(f_path)
end
end
end
end
end
end
end
Version data entries
43 entries across 43 versions & 1 rubygems