Sha256: 438ba9e51ac8597cc7b012c46ddc338594ccf954e90106c9555beba5dc1831ac

Contents?: true

Size: 392 Bytes

Versions: 6

Compression:

Stored size: 392 Bytes

Contents

When /^I relocate the annotations using "([^"]*)", "([^"]*)" and "([^"]*)"$/ do |scaffold, sequence, annotations|
  gff3 = Bio::GFF::GFF3.new

  gff3.records = Scaffolder::AnnotationLocator.new(
    'tmp/aruba/' + scaffold,
    'tmp/aruba/' + sequence,
    'tmp/aruba/' + annotations)
  @result = gff3.to_s.strip
end

Then /^the result should be:$/ do |result|
  @result.should == result
end

Version data entries

6 entries across 6 versions & 1 rubygems

Version Path
scaffolder-annotation-locator-0.2.0 features/step_definitions/scaffolder-annotation-locator_steps.rb
scaffolder-annotation-locator-0.1.4 features/step_definitions/scaffolder-annotation-locator_steps.rb
scaffolder-annotation-locator-0.1.2 features/step_definitions/scaffolder-annotation-locator_steps.rb
scaffolder-annotation-locator-0.1.1 features/step_definitions/scaffolder-annotation-locator_steps.rb
scaffolder-annotation-locator-0.1.0 features/step_definitions/scaffolder-annotation-locator_steps.rb
scaffolder-annotation-locator-0.0.1 features/step_definitions/scaffolder-annotation-locator_steps.rb