Sha256: 437210449c8576b3d4b5996eb1f16bb1ec5dbd0826d73977cee59e8b25113f6e
Contents?: true
Size: 1.18 KB
Versions: 89
Compression:
Stored size: 1.18 KB
Contents
import org.junit.Test
import kotlin.test.assertEquals
class HammingTest {
@Test
fun noDifferenceBetweenIdenticalStrands() {
assertEquals(0, Hamming.compute("A", "A"))
}
@Test
fun completeHammingDistanceOfForSingleNucleotideStrand() {
assertEquals(1, Hamming.compute("A", "G"))
}
@Test
fun completeHammingDistanceForSmallStrand() {
assertEquals(2, Hamming.compute("AG", "CT"))
}
@Test
fun smallHammingDistance() {
assertEquals(1, Hamming.compute("AT", "CT"))
}
@Test
fun smallHammingDistanceInLongerStrand() {
assertEquals(1, Hamming.compute("GGACG", "GGTCG"))
}
@Test(expected = IllegalArgumentException::class)
fun validatesFirstStrandNotLonger() {
Hamming.compute("AAAG", "AAA")
}
@Test(expected = IllegalArgumentException::class)
fun validatesOtherStrandNotLonger() {
Hamming.compute("AAA", "AAAG")
}
@Test
fun largeHammingDistance() {
assertEquals(4, Hamming.compute("GATACA", "GCATAA"))
}
@Test
fun hammingDistanceInVeryLongStrand() {
assertEquals(9, Hamming.compute("GGACGGATTCTG", "AGGACGGATTCT"))
}
}
Version data entries
89 entries across 89 versions & 1 rubygems