=== 2.0.56 2013-07-25

added split_fasta.rb script

=== 2.0.55 2013-07-23

Sanger adapters plugin. Option to disable reject by indeterminations in the middle of a sequence.

=== 2.0.54 2012-09-07

* Flag to write fastq files as fastq.gz

=== 2.0.53 2012-07-24

* Added illumina adapters
* Gzipped fastq files can be used with SeqtrimNext

=== 2.0.52 2012-06-26

* Added new plugin for user contaminants.
* Sequences contaminated with user contaminants are stored in separate files.
* Processing of both illumina fastq paired-end files in the same execution.
* Template reorganization.

=== 2.0.51 2012-06-20

Added cont_viruses database

=== 2.0.50 2012-06-13

Added classification plugin

=== 2.0.49 2012-05-24

Updated gem dependencies

=== 2.0.48 2012-05-16

Select biggest sequence on cluster 

=== 2.0.47 2012-05-14

Added option for illumina qualities based on phred+64 scores

=== 2.0.46 2012-04-13

Checkpointing activated. Jobs can be restarted where stopped.

=== 2.0.45 2012-03-05

Improved LowComplexity plugin to ignore low complexity regions inside low qual regions

=== 2.0.44 2012-02-23

Skip output

=== 2.0.43 2012-02-22

Lower logger levels

=== 2.0.42 2012-02-01

Added custom cd-hit cmd parameters

=== 2.0.41 2011-11-04

Added extra adapters plugin for transcriptomics

=== 2.0.40 2011-10-27

-Support Relative paths in user DB
-Can mix relative and absolute paths in user DB
-Custom linkers database

=== 2.0.39 2011-07-07

Fixed database list option

=== 2.0.38 2011-07-07

Optional Initial Stats generation in templates

=== 2.0.37 2011-07-07

Added option to skip initial stats

=== 2.0.36 2011-06-24

Added clustered installation documentation

=== 2.0.35 2011-06-22

FarAdapters improvement

=== 2.0.34 2011-06-21

Added some additional FAR AB_ADAPTER restrictions

=== 2.0.33 2011-06-17

Added SEQTRIMNEXT_INIT environment variable

=== 2.0.32 2011-06-15

Minor adjustements to work with INGEBIOL

=== 2.0.31 2011-06-14

Added option to not fail without gnuplot

=== 2.0.30 2011-06-14

Removed gnuplot as a prerequisite

=== 2.0.29 2011-06-06

* Initial public release on rubygems