module Bolognese module Writers module JatsWriter def jats @jats ||= Nokogiri::XML::Builder.new(:encoding => 'UTF-8') do |xml| xml.send("element-citation", publication_type) do insert_citation(xml) end end.to_xml end def insert_citation(xml) insert_authors(xml) insert_editors(xml) insert_citation_title(xml) if is_article? || is_data? || is_chapter? insert_source(xml) insert_publisher_name(xml) if publisher.present? && !is_data? insert_publication_date(xml) insert_volume(xml) if volume.present? insert_issue(xml) if issue.present? insert_fpage(xml) if first_page.present? insert_lpage(xml) if last_page.present? insert_version(xml) if b_version.present? insert_pub_id(xml) end def is_article? publication_type.fetch('publication-type', nil) == "journal" end def is_data? publication_type.fetch('publication-type', nil) == "data" end def is_chapter? publication_type.fetch('publication-type', nil) == "chapter" end def insert_authors(xml) if author.present? xml.send("person-group", "person-group-type" => "author") do Array.wrap(author).each do |creator| xml.name do insert_contributor(xml, creator) end end end end end def insert_editors(xml) if editor.present? xml.send("person-group", "person-group-type" => "editor") do Array.wrap(editor).each do |creator| xml.name do insert_contributor(xml, creator) end end end end end def insert_contributor(xml, person) xml.surname(person["familyName"]) if person["familyName"].present? xml.send("given-names", person["givenName"]) if person["givenName"].present? end def insert_citation_title(xml) case publication_type.fetch('publication-type', nil) when "data" then xml.send("data-title", parse_attributes(title, content: "text", first: true)) when "journal" then xml.send("article-title", parse_attributes(title, content: "text", first: true)) when "chapter" then xml.send("chapter-title", parse_attributes(title, content: "text", first: true)) end end def insert_source(xml) if is_article? || is_data? || is_chapter? xml.source(container_title || publisher) else xml.source(parse_attributes(title, content: "text", first: true)) end end def insert_publisher_name(xml) xml.send("publisher-name", publisher) end def insert_publication_date(xml) year, month, day = get_date_parts(date_published).to_h.fetch("date-parts", []).first xml.year(year, "iso-8601-date" => date_published) xml.month(month.to_s.rjust(2, '0')) if month.present? xml.day(day.to_s.rjust(2, '0')) if day.present? end def insert_volume(xml) xml.volume(volume) end def insert_issue(xml) xml.issue(issue) end def insert_fpage(xml) xml.fpage(first_page) end def insert_lpage(xml) xml.lpage(last_page) end def insert_version(xml) xml.version(b_version) end def insert_pub_id(xml) return nil unless doi.present? xml.send("pub-id", doi, "pub-id-type" => "doi") end def date get_date_parts(date_published) end def publication_type { 'publication-type' => Bolognese::Utils::CR_TO_JATS_TRANSLATIONS[additional_type] || Bolognese::Utils::SO_TO_JATS_TRANSLATIONS[type] }.compact end end end end