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Contents
require 'rbbt/workflow'
class RemoteWorkflow
include Workflow
attr_accessor :url, :name, :exec_exports, :synchronous_exports, :asynchronous_exports, :stream_exports
def initialize(url, name)
Log.debug{ "Loading remote workflow #{ name }: #{ url }" }
@url, @name = url, name
rest = url.include?('ssh://') ? false : true
if rest
self.extend RemoteWorkflow::REST
else
self.extend RemoteWorkflow::SSH
end
init_remote_tasks
end
def to_s
name
end
def job(task, name = nil, inputs = {})
task_info = task_info(task)
fixed_inputs = {}
input_types = IndiferentHash.setup(task_info[:input_types])
inputs.each do |k,v|
k = k.to_sym
if TSV === v
fixed_inputs[k] = v.to_s
else
next if input_types[k].nil?
case input_types[k].to_sym
when :tsv, :array, :file, :text
fixed_inputs[k] = (String === v and Open.exists?(v)) ? Open.open(v) : v
else
fixed_inputs[k] = v
end
end
end
stream_input = @can_stream ? task_info(task)[:input_options].select{|k,o| o[:stream] }.collect{|k,o| k }.first : nil
RemoteStep.new(url, task, name, fixed_inputs, task_info[:input_types], task_info[:result_type], task_info[:result_description], @exec_exports.include?(task), @stream_exports.include?(task), stream_input)
end
def load_id(id)
task, name = id.split("/")
step = RemoteStep.new url, task, nil
step.name = name
step.result_type = task_info(task)[:result_type]
step.result_description = task_info(task)[:result_description]
step
end
end
require 'rbbt/workflow/remote_workflow/driver'
require 'rbbt/workflow/remote_workflow/remote_step'
Version data entries
5 entries across 5 versions & 1 rubygems