Sha256: 1be2a2a11b900bd37412be6aba45ede607dedb7cfb09c3b0fe483276f6b59289

Contents?: true

Size: 1.65 KB

Versions: 10

Compression:

Stored size: 1.65 KB

Contents

{
  "resourceType": "MolecularSequence",
  "id": "fda-example",
  "type": "dna",
  "coordinateSystem": 1,
  "patient": {
    "reference": "Patient/example"
  },
  "referenceSeq": {
    "referenceSeqId": {
      "coding": [
        {
          "system": "http://www.ncbi.nlm.nih.gov/nuccore",
          "code": "NC_000001.11"
        }
      ]
    },
    "strand": "watson",
    "windowStart": 10453,
    "windowEnd": 101770080
  },
  "variant": [
    {
      "start": 13116,
      "end": 13117,
      "observedAllele": "T",
      "referenceAllele": "G"
    }
  ],
  "quality": [
    {
      "type": "snp",
      "standardSequence": {
        "coding": [
          {
            "system": "https://precision.fda.gov/files/",
            "code": "file-Bk50V4Q0qVb65P0v2VPbfYPZ"
          }
        ]
      },
      "start": 10453,
      "end": 101770080,
      "method": {
        "coding": [
          {
            "system": "https://precision.fda.gov/jobs/",
            "code": "job-ByxYPx809jFVy21KJG74Jg3Y"
          }
        ],
        "text": "Vcfeval + Hap.py Comparison"
      },
      "truthTP": 7749,
      "queryTP": 7984,
      "truthFN": 2554,
      "queryFP": 10670,
      "gtFP": 2186,
      "precision": 0.428005,
      "recall": 0.752111,
      "fScore": 0.545551
    }
  ],
  "repository": [
    {
      "type": "login",
      "url": "https://precision.fda.gov/files/file-Bx37ZK009P4bX5g3qjkFZV38",
      "name": "FDA",
      "variantsetId": "file-Bx37ZK009P4bX5g3qjkFZV38"
    }
  ],
  "meta": {
    "tag": [
      {
        "system": "http://terminology.hl7.org/CodeSystem/v3-ActReason",
        "code": "HTEST",
        "display": "test health data"
      }
    ]
  }
}

Version data entries

10 entries across 10 versions & 1 rubygems

Version Path
fhir_models-4.3.0 lib/fhir_models/examples/json/sequence-example-fda.json
fhir_models-4.2.2 lib/fhir_models/examples/json/sequence-example-fda.json
fhir_models-4.2.1 lib/fhir_models/examples/json/sequence-example-fda.json
fhir_models-4.2.0 lib/fhir_models/examples/json/sequence-example-fda.json
fhir_models-4.1.2 lib/fhir_models/examples/json/sequence-example-fda.json
fhir_models-4.1.1 lib/fhir_models/examples/json/sequence-example-fda.json
fhir_models-4.1.0 lib/fhir_models/examples/json/sequence-example-fda.json
fhir_models-4.0.2 lib/fhir_models/examples/json/sequence-example-fda.json
fhir_models-4.0.1 lib/fhir_models/examples/json/sequence-example-fda.json
fhir_models-4.0.0 lib/fhir_models/examples/json/sequence-example-fda.json