Contents

class OboParser::Parser
  def initialize(lexer, builder)
    @lexer = lexer
    @builder = builder
  end

  def parse_file
    # At present we ignore the header lines
    while !@lexer.peek(OboParser::Tokens::Term)
      @lexer.pop(OboParser::Tokens::TagValuePair)
    end

    i = 0
    while !@lexer.peek(OboParser::Tokens::Typedef) && !@lexer.peek(OboParser::Tokens::EndOfFile)
      raise OboParser::ParseError, "infinite loop in Terms" if i > 10000000 # there aren't that many words! 
      parse_term
      i += 1
    end

    i = 0
    while @lexer.peek(OboParser::Tokens::Typedef) 
      raise OboParser::ParseError,"infinite loop in Typedefs" if i > 1000000 
      parse_typedef
      i += 1
    end    
  end

  def parse_term
    t = @lexer.pop(OboParser::Tokens::Term)
    tags = []
    while !@lexer.peek(OboParser::Tokens::Term) && !@lexer.peek(OboParser::Tokens::Typedef) && !@lexer.peek(OboParser::Tokens::EndOfFile) 
      begin
        t = @lexer.pop(OboParser::Tokens::TagValuePair)
        tags.push(t) 
      rescue 
        raise 
      end
    end
    @builder.add_term(tags)
  end

  def parse_typedef
    @lexer.pop(OboParser::Tokens::Typedef)
    tags = []
    while !@lexer.peek(OboParser::Tokens::Typedef) && @lexer.peek(OboParser::Tokens::TagValuePair)
      begin
        t = @lexer.pop(OboParser::Tokens::TagValuePair)
        tags.push(t) 
      rescue
        raise 
      end
    end
    @builder.add_typedef(tags)
  end

end

Version data entries

4 entries across 4 versions & 1 rubygems

Version	Path
obo_parser-0.3.3	lib/parser.rb
obo_parser-0.3.2	lib/parser.rb
obo_parser-0.3.1	lib/parser.rb
obo_parser-0.3.0	lib/parser.rb