#
# = ucsc.rb
# Copyright::   Cioyrught (C) 2011
#               MISHIMA, Hiroyuki <missy at be.to / hmishima at nagasaki-u.ac.jp> 
# Copyright::   Copyright (C) 2008
#               Jan Aerts <jan.aerts@gmail.com>
# License::     Ruby's

base = File.dirname(__FILE__)
require "#{base}/hg18/db_connection"
require "#{base}/hg18/activerecord"

module Bio
  module Ucsc
    module Hg18
      base = File.dirname(__FILE__)
      # Reference sequence retrieval via the 2bit file
      autoload :Reference,    "#{base}/hg18/reference"

      autoload :RefGene,      "#{base}/hg18/refgene"
      autoload :Dgv,          "#{base}/hg18/dgv"
      autoload :CnpIafrate2,  "#{base}/hg18/cnpiafrate2"
      autoload :CnpLocke,     "#{base}/hg18/cnplocke"
      autoload :CnpRedon,     "#{base}/hg18/cnpredon"
      autoload :CnpSebat2,    "#{base}/hg18/cnpsebat2"
      autoload :CnpSharp2,    "#{base}/hg18/cnpsharp2"
      autoload :Rmsk,         "#{base}/hg18/rmsk.rb"
    end
  end
end