Sha256: 07b8be3506df02e49ea69b17bd72dbe73c12ea0b5e17008b5b7225c579527313
Contents?: true
Size: 559 Bytes
Versions: 6
Compression:
Stored size: 559 Bytes
Contents
#!/usr/bin/env ruby
require 'bio-maf'
require 'bigbio'
require 'optparse'
require 'ostruct'
options = OpenStruct.new
options.parser = Bio::MAF::Parser
OptionParser.new do |opts|
opts.banner = "Usage: maf_dump_blocks [options] <maf>"
opts.separator ""
opts.separator "Options:"
opts.on("--parser PARSER", "parser") do |name|
options.parser = Bio::MAF.const_get(name)
end
end.parse!(ARGV)
src_path = ARGV.shift
parser = options.parser.new(src_path)
parser.each_block do |block|
$stdout.printf("%12d\t%7d\n", block.offset, block.size)
end
Version data entries
6 entries across 6 versions & 1 rubygems